Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMNAP02545 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMNAP02545 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.26■□□□□ 0.03
LMNAP02545 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMNAP02545 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LMNAP02545 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LMNAP02545 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMNAP02545 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMNAP02545 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.25■□□□□ 0.03
LMNAP02545 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMNAP02545 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
LMNAP02545 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
LMNAP02545 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LMNAP02545 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
LMNAP02545 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMNAP02545 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
LMNAP02545 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMNAP02545 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMNAP02545 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LMNAP02545 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LMNAP02545 RNU1-114P-201ENST00000365297 166 ntBASIC15.25■□□□□ 0.03
LMNAP02545 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMNAP02545 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LMNAP02545 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.25■□□□□ 0.03
LMNAP02545 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC15.25■□□□□ 0.03
LMNAP02545 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.25■□□□□ 0.03
LMNAP02545 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC15.25■□□□□ 0.03
LMNAP02545 AC103988.2-201ENST00000561804 725 ntBASIC15.25■□□□□ 0.03
LMNAP02545 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.25■□□□□ 0.03
LMNAP02545 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
LMNAP02545 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMNAP02545 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMNAP02545 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.25■□□□□ 0.03
LMNAP02545 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMNAP02545 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LMNAP02545 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.25■□□□□ 0.03
LMNAP02545 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.25■□□□□ 0.03
LMNAP02545 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
LMNAP02545 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
LMNAP02545 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LMNAP02545 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMNAP02545 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMNAP02545 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
LMNAP02545 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LMNAP02545 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMNAP02545 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.25■□□□□ 0.03
LMNAP02545 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.25■□□□□ 0.03
LMNAP02545 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.25■□□□□ 0.03
LMNAP02545 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.25■□□□□ 0.03
LMNAP02545 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LMNAP02545 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMNAP02545 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LMNAP02545 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMNAP02545 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LMNAP02545 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LMNAP02545 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
LMNAP02545 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMNAP02545 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.24■□□□□ 0.03
LMNAP02545 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.24■□□□□ 0.03
LMNAP02545 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMNAP02545 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LMNAP02545 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.24■□□□□ 0.03
LMNAP02545 LRRC59-203ENST00000576448 1531 ntBASIC15.24■□□□□ 0.03
LMNAP02545 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMNAP02545 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LMNAP02545 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.24■□□□□ 0.03
LMNAP02545 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
LMNAP02545 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMNAP02545 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.24■□□□□ 0.03
LMNAP02545 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMNAP02545 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LMNAP02545 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC15.24■□□□□ 0.03
LMNAP02545 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.24■□□□□ 0.03
LMNAP02545 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMNAP02545 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMNAP02545 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
LMNAP02545 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15.24■□□□□ 0.03
LMNAP02545 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC15.24■□□□□ 0.03
LMNAP02545 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.24■□□□□ 0.03
LMNAP02545 AC116345.2-201ENST00000512837 523 ntBASIC15.24■□□□□ 0.03
LMNAP02545 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LMNAP02545 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMNAP02545 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC15.24■□□□□ 0.03
LMNAP02545 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.24■□□□□ 0.03
LMNAP02545 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.24■□□□□ 0.03
LMNAP02545 BNIP3P13-201ENST00000599968 566 ntBASIC15.24■□□□□ 0.03
LMNAP02545 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMNAP02545 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
LMNAP02545 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMNAP02545 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMNAP02545 KRT8P4-201ENST00000509735 1454 ntBASIC15.24■□□□□ 0.03
LMNAP02545 AP001282.1-201ENST00000531301 1499 ntBASIC15.24■□□□□ 0.03
LMNAP02545 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.24■□□□□ 0.03
LMNAP02545 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMNAP02545 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.24■□□□□ 0.03
LMNAP02545 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMNAP02545 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
LMNAP02545 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.24■□□□□ 0.03
LMNAP02545 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMNAP02545 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms