Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CD4P01730 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.87■□□□□ 0.13
CD4P01730 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CD4P01730 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.87■□□□□ 0.13
CD4P01730 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD4P01730 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD4P01730 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CD4P01730 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD4P01730 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD4P01730 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD4P01730 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD4P01730 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD4P01730 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.87■□□□□ 0.13
CD4P01730 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD4P01730 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC15.86■□□□□ 0.13
CD4P01730 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD4P01730 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD4P01730 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD4P01730 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD4P01730 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD4P01730 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.86■□□□□ 0.13
CD4P01730 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CD4P01730 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.86■□□□□ 0.13
CD4P01730 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD4P01730 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.86■□□□□ 0.13
CD4P01730 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.86■□□□□ 0.13
CD4P01730 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD4P01730 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD4P01730 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
CD4P01730 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD4P01730 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.86■□□□□ 0.13
CD4P01730 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD4P01730 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.86■□□□□ 0.13
CD4P01730 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD4P01730 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CD4P01730 PYY2-201ENST00000315776 282 ntBASIC15.86■□□□□ 0.13
CD4P01730 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CD4P01730 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CD4P01730 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CD4P01730 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CD4P01730 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC15.86■□□□□ 0.13
CD4P01730 KRT17P4-201ENST00000429445 819 ntBASIC15.86■□□□□ 0.13
CD4P01730 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.86■□□□□ 0.13
CD4P01730 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC15.86■□□□□ 0.13
CD4P01730 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD4P01730 AC093826.1-201ENST00000508655 993 ntBASIC15.86■□□□□ 0.13
CD4P01730 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC15.86■□□□□ 0.13
CD4P01730 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC15.86■□□□□ 0.13
CD4P01730 AC012158.2-201ENST00000536546 354 ntBASIC15.86■□□□□ 0.13
CD4P01730 AC226150.1-201ENST00000544259 466 ntBASIC15.86■□□□□ 0.13
CD4P01730 AC055811.3-201ENST00000584952 686 ntBASIC15.86■□□□□ 0.13
CD4P01730 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.86■□□□□ 0.13
CD4P01730 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD4P01730 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CD4P01730 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.86■□□□□ 0.13
CD4P01730 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
CD4P01730 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD4P01730 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.86■□□□□ 0.13
CD4P01730 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CD4P01730 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD4P01730 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD4P01730 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD4P01730 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CD4P01730 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD4P01730 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD4P01730 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.86■□□□□ 0.13
CD4P01730 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD4P01730 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD4P01730 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.86■□□□□ 0.13
CD4P01730 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.86■□□□□ 0.13
CD4P01730 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD4P01730 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.85■□□□□ 0.13
CD4P01730 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD4P01730 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.85■□□□□ 0.13
CD4P01730 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD4P01730 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CD4P01730 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD4P01730 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD4P01730 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD4P01730 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CD4P01730 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD4P01730 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD4P01730 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC15.85■□□□□ 0.13
CD4P01730 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD4P01730 RGS5-216ENST00000449680 788 ntTSL 3 BASIC15.85■□□□□ 0.13
CD4P01730 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC15.85■□□□□ 0.13
CD4P01730 RN7SL23P-201ENST00000484055 275 ntBASIC15.85■□□□□ 0.13
CD4P01730 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC15.85■□□□□ 0.13
CD4P01730 FAM86B3P-203ENST00000523992 854 ntBASIC15.85■□□□□ 0.13
CD4P01730 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC15.85■□□□□ 0.13
CD4P01730 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CD4P01730 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC15.85■□□□□ 0.13
CD4P01730 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC15.85■□□□□ 0.13
CD4P01730 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC15.85■□□□□ 0.13
CD4P01730 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC15.85■□□□□ 0.13
CD4P01730 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC15.85■□□□□ 0.13
CD4P01730 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD4P01730 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD4P01730 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.85■□□□□ 0.13
CD4P01730 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms