Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFBP01127 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFBP01127 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFBP01127 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PDGFBP01127 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFBP01127 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.31□□□□□ -0.12
PDGFBP01127 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFBP01127 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFBP01127 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFBP01127 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFBP01127 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.31□□□□□ -0.12
PDGFBP01127 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFBP01127 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC14.31□□□□□ -0.12
PDGFBP01127 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PDGFBP01127 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.31□□□□□ -0.12
PDGFBP01127 AC112693.3-201ENST00000624819 1983 ntBASIC14.31□□□□□ -0.12
PDGFBP01127 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PDGFBP01127 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PDGFBP01127 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.31□□□□□ -0.12
PDGFBP01127 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PDGFBP01127 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFBP01127 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFBP01127 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFBP01127 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFBP01127 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.3□□□□□ -0.12
PDGFBP01127 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFBP01127 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFBP01127 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFBP01127 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFBP01127 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFBP01127 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.3□□□□□ -0.12
PDGFBP01127 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFBP01127 SIRPB3P-201ENST00000340424 1216 ntBASIC14.3□□□□□ -0.12
PDGFBP01127 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFBP01127 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC14.3□□□□□ -0.12
PDGFBP01127 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFBP01127 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFBP01127 DKKL1P1-201ENST00000400550 698 ntBASIC14.3□□□□□ -0.12
PDGFBP01127 MED15P3-201ENST00000413613 326 ntBASIC14.3□□□□□ -0.12
PDGFBP01127 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC14.3□□□□□ -0.12
PDGFBP01127 SNRPCP15-201ENST00000424055 192 ntBASIC14.3□□□□□ -0.12
PDGFBP01127 FDPSP7-201ENST00000429043 1054 ntBASIC14.3□□□□□ -0.12
PDGFBP01127 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFBP01127 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC14.3□□□□□ -0.12
PDGFBP01127 KRT19P4-201ENST00000443208 943 ntBASIC14.3□□□□□ -0.12
PDGFBP01127 NALT1-202ENST00000450304 437 ntTSL 3 BASIC14.3□□□□□ -0.12
PDGFBP01127 AC092910.2-201ENST00000491262 348 ntBASIC14.3□□□□□ -0.12
PDGFBP01127 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC14.3□□□□□ -0.12
PDGFBP01127 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFBP01127 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
PDGFBP01127 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFBP01127 AL359219.1-201ENST00000556311 934 ntBASIC14.3□□□□□ -0.12
PDGFBP01127 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC14.3□□□□□ -0.12
PDGFBP01127 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.3□□□□□ -0.12
PDGFBP01127 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PDGFBP01127 AC005865.2-202ENST00000635814 725 ntBASIC14.3□□□□□ -0.12
PDGFBP01127 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC14.3□□□□□ -0.12
PDGFBP01127 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFBP01127 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFBP01127 AC020931.1-201ENST00000589622 1346 ntBASIC14.3□□□□□ -0.12
PDGFBP01127 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFBP01127 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.3□□□□□ -0.12
PDGFBP01127 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
PDGFBP01127 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFBP01127 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PDGFBP01127 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC14.3□□□□□ -0.12
PDGFBP01127 AC117503.4-201ENST00000623229 1418 ntBASIC14.3□□□□□ -0.12
PDGFBP01127 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
PDGFBP01127 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFBP01127 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.3□□□□□ -0.12
PDGFBP01127 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.3□□□□□ -0.12
PDGFBP01127 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFBP01127 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFBP01127 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFBP01127 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFBP01127 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PDGFBP01127 AL137077.2-201ENST00000635124 1608 ntBASIC14.3□□□□□ -0.12
PDGFBP01127 CYP2T1P-202ENST00000641596 2535 ntBASIC14.3□□□□□ -0.12
PDGFBP01127 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.29□□□□□ -0.12
PDGFBP01127 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.29□□□□□ -0.12
PDGFBP01127 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.29□□□□□ -0.12
PDGFBP01127 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
PDGFBP01127 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
PDGFBP01127 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.29□□□□□ -0.12
PDGFBP01127 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC14.29□□□□□ -0.12
PDGFBP01127 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC14.29□□□□□ -0.12
PDGFBP01127 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC14.29□□□□□ -0.12
PDGFBP01127 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
PDGFBP01127 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PDGFBP01127 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC14.29□□□□□ -0.12
PDGFBP01127 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC14.29□□□□□ -0.12
PDGFBP01127 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms