Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GPC4O75487 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
GPC4O75487 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.62□□□□□ -0.07
GPC4O75487 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.62□□□□□ -0.07
GPC4O75487 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
GPC4O75487 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
GPC4O75487 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
GPC4O75487 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GPC4O75487 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
GPC4O75487 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GPC4O75487 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
GPC4O75487 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GPC4O75487 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
GPC4O75487 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.62□□□□□ -0.07
GPC4O75487 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.62□□□□□ -0.07
GPC4O75487 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
GPC4O75487 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC14.61□□□□□ -0.07
GPC4O75487 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GPC4O75487 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.61□□□□□ -0.07
GPC4O75487 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.61□□□□□ -0.07
GPC4O75487 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.61□□□□□ -0.07
GPC4O75487 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GPC4O75487 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
GPC4O75487 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GPC4O75487 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GPC4O75487 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GPC4O75487 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GPC4O75487 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.61□□□□□ -0.07
GPC4O75487 AC009093.2-202ENST00000620513 2079 ntBASIC14.61□□□□□ -0.07
GPC4O75487 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.61□□□□□ -0.07
GPC4O75487 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
GPC4O75487 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GPC4O75487 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GPC4O75487 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.61□□□□□ -0.07
GPC4O75487 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GPC4O75487 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.61□□□□□ -0.07
GPC4O75487 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GPC4O75487 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
GPC4O75487 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
GPC4O75487 AC004945.1-201ENST00000416738 983 ntBASIC14.61□□□□□ -0.07
GPC4O75487 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.61□□□□□ -0.07
GPC4O75487 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.61□□□□□ -0.07
GPC4O75487 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
GPC4O75487 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.61□□□□□ -0.07
GPC4O75487 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.61□□□□□ -0.07
GPC4O75487 GPR53P-205ENST00000457298 1084 ntBASIC14.61□□□□□ -0.07
GPC4O75487 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.61□□□□□ -0.07
GPC4O75487 C2orf69P2-201ENST00000562032 1123 ntBASIC14.61□□□□□ -0.07
GPC4O75487 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.61□□□□□ -0.07
GPC4O75487 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.61□□□□□ -0.07
GPC4O75487 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.61□□□□□ -0.07
GPC4O75487 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.61□□□□□ -0.07
GPC4O75487 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
GPC4O75487 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GPC4O75487 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GPC4O75487 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GPC4O75487 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GPC4O75487 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GPC4O75487 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GPC4O75487 AHCYP2-201ENST00000430630 1300 ntBASIC14.61□□□□□ -0.07
GPC4O75487 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GPC4O75487 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GPC4O75487 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.61□□□□□ -0.07
GPC4O75487 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GPC4O75487 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GPC4O75487 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GPC4O75487 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
GPC4O75487 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GPC4O75487 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.61□□□□□ -0.07
GPC4O75487 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
GPC4O75487 MEX3B-202ENST00000558133 4333 ntBASIC14.6□□□□□ -0.07
GPC4O75487 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GPC4O75487 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.6□□□□□ -0.07
GPC4O75487 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GPC4O75487 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.6□□□□□ -0.07
GPC4O75487 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
GPC4O75487 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.6□□□□□ -0.07
GPC4O75487 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GPC4O75487 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GPC4O75487 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GPC4O75487 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.6□□□□□ -0.07
GPC4O75487 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GPC4O75487 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.6□□□□□ -0.07
GPC4O75487 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.6□□□□□ -0.07
GPC4O75487 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.6□□□□□ -0.07
GPC4O75487 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GPC4O75487 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GPC4O75487 MIR1202-201ENST00000408529 83 ntBASIC14.6□□□□□ -0.07
GPC4O75487 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GPC4O75487 AC026954.1-201ENST00000429771 1293 ntBASIC14.6□□□□□ -0.07
GPC4O75487 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.6□□□□□ -0.07
GPC4O75487 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.6□□□□□ -0.07
GPC4O75487 HILS1-202ENST00000545329 423 ntBASIC14.6□□□□□ -0.07
GPC4O75487 AC079316.1-201ENST00000548397 411 ntBASIC14.6□□□□□ -0.07
GPC4O75487 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GPC4O75487 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.6□□□□□ -0.07
GPC4O75487 RN7SL713P-201ENST00000582127 302 ntBASIC14.6□□□□□ -0.07
GPC4O75487 AC073413.1-201ENST00000603927 732 ntBASIC14.6□□□□□ -0.07
GPC4O75487 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.6□□□□□ -0.07
GPC4O75487 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms