Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.64□□□□□ -0.23
HCN1O60741 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.64□□□□□ -0.23
HCN1O60741 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.64□□□□□ -0.23
HCN1O60741 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HCN1O60741 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.64□□□□□ -0.23
HCN1O60741 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.64□□□□□ -0.23
HCN1O60741 MIR6787-201ENST00000616675 61 ntBASIC13.64□□□□□ -0.23
HCN1O60741 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.64□□□□□ -0.23
HCN1O60741 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.64□□□□□ -0.23
HCN1O60741 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HCN1O60741 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 AC027612.1-201ENST00000445234 2395 ntBASIC13.64□□□□□ -0.23
HCN1O60741 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 MST1P2-201ENST00000457982 2291 ntBASIC13.64□□□□□ -0.23
HCN1O60741 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.63□□□□□ -0.23
HCN1O60741 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.63□□□□□ -0.23
HCN1O60741 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HCN1O60741 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.63□□□□□ -0.23
HCN1O60741 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
HCN1O60741 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HCN1O60741 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.63□□□□□ -0.23
HCN1O60741 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.63□□□□□ -0.23
HCN1O60741 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HCN1O60741 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.63□□□□□ -0.23
HCN1O60741 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.63□□□□□ -0.23
HCN1O60741 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.63□□□□□ -0.23
HCN1O60741 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.63□□□□□ -0.23
HCN1O60741 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.63□□□□□ -0.23
HCN1O60741 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.63□□□□□ -0.23
HCN1O60741 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.63□□□□□ -0.23
HCN1O60741 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.63□□□□□ -0.23
HCN1O60741 AL591846.1-201ENST00000451736 433 ntBASIC13.63□□□□□ -0.23
HCN1O60741 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.63□□□□□ -0.23
HCN1O60741 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.63□□□□□ -0.23
HCN1O60741 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.63□□□□□ -0.23
HCN1O60741 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.63□□□□□ -0.23
HCN1O60741 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 AP006547.1-201ENST00000563435 692 ntBASIC13.63□□□□□ -0.23
HCN1O60741 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.63□□□□□ -0.23
HCN1O60741 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.63□□□□□ -0.23
HCN1O60741 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.63□□□□□ -0.23
HCN1O60741 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.63□□□□□ -0.23
HCN1O60741 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.63□□□□□ -0.23
HCN1O60741 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.63□□□□□ -0.23
HCN1O60741 AL022328.3-201ENST00000607943 679 ntBASIC13.63□□□□□ -0.23
HCN1O60741 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.63□□□□□ -0.23
HCN1O60741 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.63□□□□□ -0.23
HCN1O60741 AC244157.2-201ENST00000616239 1006 ntBASIC13.63□□□□□ -0.23
HCN1O60741 AC138466.3-201ENST00000619983 221 ntBASIC13.63□□□□□ -0.23
HCN1O60741 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.63□□□□□ -0.23
HCN1O60741 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.63□□□□□ -0.23
HCN1O60741 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HCN1O60741 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
HCN1O60741 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
HCN1O60741 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.63□□□□□ -0.23
HCN1O60741 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.63□□□□□ -0.23
HCN1O60741 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.63□□□□□ -0.23
HCN1O60741 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 AC089987.1-201ENST00000551654 2209 ntBASIC13.63□□□□□ -0.23
HCN1O60741 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HCN1O60741 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HCN1O60741 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCN1O60741 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCN1O60741 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms