Protein–RNA interactions for Protein: O43294

TGFB1I1, Transforming growth factor beta-1-induced transcript 1 protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1I1O43294 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TGFB1I1O43294 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TGFB1I1O43294 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TGFB1I1O43294 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TGFB1I1O43294 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TGFB1I1O43294 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TGFB1I1O43294 SHMT1P1-201ENST00000419974 1312 ntBASIC15.68■□□□□ 0.1
TGFB1I1O43294 LINC01815-202ENST00000641468 1409 ntBASIC15.68■□□□□ 0.1
TGFB1I1O43294 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TGFB1I1O43294 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.68■□□□□ 0.1
TGFB1I1O43294 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TGFB1I1O43294 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TGFB1I1O43294 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TGFB1I1O43294 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TGFB1I1O43294 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.68■□□□□ 0.1
TGFB1I1O43294 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TGFB1I1O43294 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TGFB1I1O43294 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TGFB1I1O43294 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.68■□□□□ 0.1
TGFB1I1O43294 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TGFB1I1O43294 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TGFB1I1O43294 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TGFB1I1O43294 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.68■□□□□ 0.1
TGFB1I1O43294 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.68■□□□□ 0.1
TGFB1I1O43294 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TGFB1I1O43294 RCC2P8-201ENST00000502779 1035 ntBASIC15.68■□□□□ 0.1
TGFB1I1O43294 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.68■□□□□ 0.1
TGFB1I1O43294 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TGFB1I1O43294 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.68■□□□□ 0.1
TGFB1I1O43294 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TGFB1I1O43294 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TGFB1I1O43294 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TGFB1I1O43294 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TGFB1I1O43294 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TGFB1I1O43294 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TGFB1I1O43294 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TGFB1I1O43294 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TGFB1I1O43294 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TGFB1I1O43294 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TGFB1I1O43294 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TGFB1I1O43294 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TGFB1I1O43294 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TGFB1I1O43294 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TGFB1I1O43294 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TGFB1I1O43294 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TGFB1I1O43294 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TGFB1I1O43294 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.67■□□□□ 0.1
TGFB1I1O43294 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TGFB1I1O43294 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.67■□□□□ 0.1
TGFB1I1O43294 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TGFB1I1O43294 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TGFB1I1O43294 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TGFB1I1O43294 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TGFB1I1O43294 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.67■□□□□ 0.1
TGFB1I1O43294 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.67■□□□□ 0.1
TGFB1I1O43294 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TGFB1I1O43294 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.67■□□□□ 0.1
TGFB1I1O43294 AC103592.1-201ENST00000394513 664 ntBASIC15.67■□□□□ 0.1
TGFB1I1O43294 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TGFB1I1O43294 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.67■□□□□ 0.1
TGFB1I1O43294 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TGFB1I1O43294 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.67■□□□□ 0.1
TGFB1I1O43294 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TGFB1I1O43294 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TGFB1I1O43294 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TGFB1I1O43294 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TGFB1I1O43294 LINC01165-201ENST00000445190 1623 ntBASIC15.67■□□□□ 0.1
TGFB1I1O43294 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TGFB1I1O43294 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TGFB1I1O43294 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.67■□□□□ 0.1
TGFB1I1O43294 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TGFB1I1O43294 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TGFB1I1O43294 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TGFB1I1O43294 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.67■□□□□ 0.1
TGFB1I1O43294 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TGFB1I1O43294 AC089987.1-201ENST00000551654 2209 ntBASIC15.67■□□□□ 0.1
TGFB1I1O43294 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.67■□□□□ 0.1
TGFB1I1O43294 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.67■□□□□ 0.1
TGFB1I1O43294 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TGFB1I1O43294 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TGFB1I1O43294 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TGFB1I1O43294 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TGFB1I1O43294 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TGFB1I1O43294 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.66■□□□□ 0.1
TGFB1I1O43294 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
TGFB1I1O43294 OR2I1P-210ENST00000642037 4691 ntBASIC15.66■□□□□ 0.1
TGFB1I1O43294 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TGFB1I1O43294 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TGFB1I1O43294 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TGFB1I1O43294 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.66■□□□□ 0.1
TGFB1I1O43294 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TGFB1I1O43294 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TGFB1I1O43294 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.66■□□□□ 0.1
TGFB1I1O43294 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TGFB1I1O43294 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TGFB1I1O43294 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TGFB1I1O43294 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TGFB1I1O43294 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TGFB1I1O43294 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TGFB1I1O43294 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms