Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
UPK2O00526 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
UPK2O00526 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
UPK2O00526 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC11.65□□□□□ -0.55
UPK2O00526 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC11.65□□□□□ -0.55
UPK2O00526 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
UPK2O00526 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
UPK2O00526 AC015909.5-201ENST00000624336 2266 ntBASIC11.65□□□□□ -0.55
UPK2O00526 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
UPK2O00526 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC11.64□□□□□ -0.55
UPK2O00526 FAM90A12P-201ENST00000519497 2375 ntBASIC11.64□□□□□ -0.55
UPK2O00526 FAM90A24P-201ENST00000520792 2369 ntBASIC11.64□□□□□ -0.55
UPK2O00526 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
UPK2O00526 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC11.64□□□□□ -0.55
UPK2O00526 HADH-202ENST00000403312 1752 ntTSL 5 BASIC11.64□□□□□ -0.55
UPK2O00526 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC11.64□□□□□ -0.55
UPK2O00526 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC11.64□□□□□ -0.55
UPK2O00526 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC11.64□□□□□ -0.55
UPK2O00526 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC11.64□□□□□ -0.55
UPK2O00526 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 RPF1-202ENST00000370656 724 ntTSL 2 BASIC11.64□□□□□ -0.55
UPK2O00526 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC11.64□□□□□ -0.55
UPK2O00526 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
UPK2O00526 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC11.64□□□□□ -0.55
UPK2O00526 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 SKA2-202ENST00000437036 625 ntTSL 2 BASIC11.64□□□□□ -0.55
UPK2O00526 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC11.64□□□□□ -0.55
UPK2O00526 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
UPK2O00526 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC11.64□□□□□ -0.55
UPK2O00526 AC078819.1-201ENST00000547454 765 ntBASIC11.64□□□□□ -0.55
UPK2O00526 AC012085.1-201ENST00000548270 765 ntBASIC11.64□□□□□ -0.55
UPK2O00526 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC11.64□□□□□ -0.55
UPK2O00526 BAP1-211ENST00000615113 489 ntBASIC11.64□□□□□ -0.55
UPK2O00526 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
UPK2O00526 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC11.64□□□□□ -0.55
UPK2O00526 AC138951.2-201ENST00000623455 1161 ntBASIC11.64□□□□□ -0.55
UPK2O00526 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 AC105206.1-202ENST00000314927 2368 ntBASIC11.64□□□□□ -0.55
UPK2O00526 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC11.64□□□□□ -0.55
UPK2O00526 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC11.64□□□□□ -0.55
UPK2O00526 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC11.64□□□□□ -0.55
UPK2O00526 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
UPK2O00526 AC005252.3-201ENST00000623855 2258 ntBASIC11.63□□□□□ -0.55
UPK2O00526 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UPK2O00526 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
UPK2O00526 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UPK2O00526 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UPK2O00526 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
UPK2O00526 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC11.63□□□□□ -0.55
UPK2O00526 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC11.63□□□□□ -0.55
UPK2O00526 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
UPK2O00526 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
UPK2O00526 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
UPK2O00526 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
UPK2O00526 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UPK2O00526 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UPK2O00526 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
UPK2O00526 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC11.63□□□□□ -0.55
UPK2O00526 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
UPK2O00526 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UPK2O00526 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
UPK2O00526 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
UPK2O00526 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms