Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTAGE9A4FU28 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTAGE9A4FU28 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CTAGE9A4FU28 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC15.53■□□□□ 0.08
CTAGE9A4FU28 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CTAGE9A4FU28 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTAGE9A4FU28 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTAGE9A4FU28 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 USP17L6P-201ENST00000382470 1197 ntBASIC15.52■□□□□ 0.08
CTAGE9A4FU28 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.52■□□□□ 0.08
CTAGE9A4FU28 TREML5P-201ENST00000421694 576 ntBASIC15.52■□□□□ 0.08
CTAGE9A4FU28 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.52■□□□□ 0.08
CTAGE9A4FU28 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 IGHV3-42-201ENST00000520410 361 ntBASIC15.52■□□□□ 0.08
CTAGE9A4FU28 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 SPDYE22P-201ENST00000582158 798 ntBASIC15.52■□□□□ 0.08
CTAGE9A4FU28 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 AC007431.3-201ENST00000623221 587 ntBASIC15.52■□□□□ 0.08
CTAGE9A4FU28 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 OS9-206ENST00000435406 2346 ntTSL 2 BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 AC125807.2-201ENST00000513358 3514 ntBASIC15.52■□□□□ 0.07
CTAGE9A4FU28 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 CARS-214ENST00000529772 2637 ntTSL 2 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 KLF2P2-201ENST00000416807 1039 ntBASIC15.51■□□□□ 0.07
CTAGE9A4FU28 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 AL589987.1-201ENST00000453380 819 ntBASIC15.51■□□□□ 0.07
CTAGE9A4FU28 AC097493.3-201ENST00000509725 367 ntBASIC15.51■□□□□ 0.07
CTAGE9A4FU28 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 AL158211.3-201ENST00000607385 239 ntBASIC15.51■□□□□ 0.07
CTAGE9A4FU28 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 LRRC59-203ENST00000576448 1531 ntBASIC15.51■□□□□ 0.07
CTAGE9A4FU28 AP000437.1-201ENST00000624057 2085 ntBASIC15.51■□□□□ 0.07
CTAGE9A4FU28 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 AC024075.2-201ENST00000598112 1473 ntBASIC15.51■□□□□ 0.07
CTAGE9A4FU28 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 DLX4-206ENST00000611342 1662 ntBASIC15.51■□□□□ 0.07
CTAGE9A4FU28 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTAGE9A4FU28 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CTAGE9A4FU28 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms