Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTAGE9A4FU28 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTAGE9A4FU28 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CTAGE9A4FU28 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC15.53■□□□□ 0.08
CTAGE9A4FU28 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CTAGE9A4FU28 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTAGE9A4FU28 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTAGE9A4FU28 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 USP17L6P-201ENST00000382470 1197 ntBASIC15.52■□□□□ 0.08
CTAGE9A4FU28 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.52■□□□□ 0.08
CTAGE9A4FU28 TREML5P-201ENST00000421694 576 ntBASIC15.52■□□□□ 0.08
CTAGE9A4FU28 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.52■□□□□ 0.08
CTAGE9A4FU28 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 IGHV3-42-201ENST00000520410 361 ntBASIC15.52■□□□□ 0.08
CTAGE9A4FU28 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 SPDYE22P-201ENST00000582158 798 ntBASIC15.52■□□□□ 0.08
CTAGE9A4FU28 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.52■□□□□ 0.08
CTAGE9A4FU28 AC007431.3-201ENST00000623221 587 ntBASIC15.52■□□□□ 0.08
CTAGE9A4FU28 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 OS9-206ENST00000435406 2346 ntTSL 2 BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 AC125807.2-201ENST00000513358 3514 ntBASIC15.52■□□□□ 0.07
CTAGE9A4FU28 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CTAGE9A4FU28 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 CARS-214ENST00000529772 2637 ntTSL 2 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 KLF2P2-201ENST00000416807 1039 ntBASIC15.51■□□□□ 0.07
CTAGE9A4FU28 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 AL589987.1-201ENST00000453380 819 ntBASIC15.51■□□□□ 0.07
CTAGE9A4FU28 AC097493.3-201ENST00000509725 367 ntBASIC15.51■□□□□ 0.07
CTAGE9A4FU28 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 AL158211.3-201ENST00000607385 239 ntBASIC15.51■□□□□ 0.07
CTAGE9A4FU28 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 LRRC59-203ENST00000576448 1531 ntBASIC15.51■□□□□ 0.07
CTAGE9A4FU28 AP000437.1-201ENST00000624057 2085 ntBASIC15.51■□□□□ 0.07
CTAGE9A4FU28 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 AC024075.2-201ENST00000598112 1473 ntBASIC15.51■□□□□ 0.07
CTAGE9A4FU28 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC15.51■□□□□ 0.07
CTAGE9A4FU28 DLX4-206ENST00000611342 1662 ntBASIC15.51■□□□□ 0.07
CTAGE9A4FU28 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTAGE9A4FU28 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CTAGE9A4FU28 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms