Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
KCNIP3Q9Y2W7 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.21□□□□□ -0.46
KCNIP3Q9Y2W7 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
KCNIP3Q9Y2W7 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
KCNIP3Q9Y2W7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
KCNIP3Q9Y2W7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.21□□□□□ -0.46
KCNIP3Q9Y2W7 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
KCNIP3Q9Y2W7 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
KCNIP3Q9Y2W7 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
KCNIP3Q9Y2W7 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 TUBB8P4-201ENST00000511806 1324 ntBASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 ALG1L5P-201ENST00000482043 771 ntBASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 MEIS3P1-201ENST00000495167 958 ntBASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 AC093813.1-201ENST00000605066 256 ntBASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 BX539320.1-201ENST00000623759 877 ntBASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 PRSS30P-206ENST00000641773 873 ntBASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 AC004241.5-201ENST00000623870 2448 ntBASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 KHSRPP1-201ENST00000427983 1768 ntBASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
KCNIP3Q9Y2W7 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms