Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 AC098657.1-201ENST00000416270 1135 ntBASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 FAM21EP-201ENST00000417804 985 ntBASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 AHCYP3-201ENST00000420053 1279 ntBASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 HNRNPA1P56-201ENST00000505767 954 ntBASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 AC091769.1-201ENST00000619576 568 ntBASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 RARS-210ENST00000626454 177 ntTSL 5 BASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZC3H4Q9UPT8 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 AC022080.1-201ENST00000366255 781 ntBASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 AC073869.4-201ENST00000620841 800 ntBASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 AC006486.2-201ENST00000624246 2199 ntBASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 CICP24-201ENST00000605464 2705 ntBASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC17.27■□□□□ 0.36
ZC3H4Q9UPT8 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ZC3H4Q9UPT8 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZC3H4Q9UPT8 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZC3H4Q9UPT8 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZC3H4Q9UPT8 TCAF2P1-201ENST00000291129 2421 ntBASIC17.27■□□□□ 0.35
ZC3H4Q9UPT8 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.27■□□□□ 0.35
ZC3H4Q9UPT8 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
ZC3H4Q9UPT8 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZC3H4Q9UPT8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.27■□□□□ 0.35
ZC3H4Q9UPT8 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
ZC3H4Q9UPT8 SNX18-202ENST00000343017 3140 ntBASIC17.27■□□□□ 0.35
ZC3H4Q9UPT8 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZC3H4Q9UPT8 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
ZC3H4Q9UPT8 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZC3H4Q9UPT8 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.27■□□□□ 0.35
ZC3H4Q9UPT8 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.27■□□□□ 0.35
ZC3H4Q9UPT8 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZC3H4Q9UPT8 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 AC026412.1-206ENST00000502273 206 ntBASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 AP000845.1-201ENST00000581677 2131 ntBASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 AL136982.5-201ENST00000605222 294 ntBASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 URAHP-205ENST00000610227 398 ntBASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms