Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 RN7SL692P-201ENST00000464677 288 ntBASIC12.88□□□□□ -0.35
DUX4Q9UBX2 GAPDHP40-201ENST00000505218 1006 ntBASIC12.88□□□□□ -0.35
DUX4Q9UBX2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.88□□□□□ -0.35
DUX4Q9UBX2 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
DUX4Q9UBX2 AC120045.2-201ENST00000567334 178 ntBASIC12.88□□□□□ -0.35
DUX4Q9UBX2 AC124283.3-201ENST00000570869 594 ntBASIC12.88□□□□□ -0.35
DUX4Q9UBX2 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
DUX4Q9UBX2 TMEM261P1-201ENST00000604899 340 ntBASIC12.88□□□□□ -0.35
DUX4Q9UBX2 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.88□□□□□ -0.35
DUX4Q9UBX2 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
DUX4Q9UBX2 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
DUX4Q9UBX2 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.88□□□□□ -0.35
DUX4Q9UBX2 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
DUX4Q9UBX2 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.88□□□□□ -0.35
DUX4Q9UBX2 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC12.88□□□□□ -0.35
DUX4Q9UBX2 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.88□□□□□ -0.35
DUX4Q9UBX2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.88□□□□□ -0.35
DUX4Q9UBX2 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
DUX4Q9UBX2 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
DUX4Q9UBX2 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
DUX4Q9UBX2 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
DUX4Q9UBX2 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
DUX4Q9UBX2 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.88□□□□□ -0.35
DUX4Q9UBX2 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
DUX4Q9UBX2 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
DUX4Q9UBX2 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
DUX4Q9UBX2 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
DUX4Q9UBX2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.88□□□□□ -0.35
DUX4Q9UBX2 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 AC026410.3-201ENST00000514280 936 ntBASIC12.87□□□□□ -0.35
DUX4Q9UBX2 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 AC105233.6-201ENST00000642093 218 ntBASIC12.87□□□□□ -0.35
DUX4Q9UBX2 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
DUX4Q9UBX2 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.86□□□□□ -0.35
DUX4Q9UBX2 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
DUX4Q9UBX2 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
DUX4Q9UBX2 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.86□□□□□ -0.35
DUX4Q9UBX2 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.86□□□□□ -0.35
DUX4Q9UBX2 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
DUX4Q9UBX2 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.86□□□□□ -0.35
DUX4Q9UBX2 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.86□□□□□ -0.35
DUX4Q9UBX2 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
DUX4Q9UBX2 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
DUX4Q9UBX2 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.86□□□□□ -0.35
DUX4Q9UBX2 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
DUX4Q9UBX2 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
DUX4Q9UBX2 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
DUX4Q9UBX2 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
DUX4Q9UBX2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms