Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 AC018529.2-202ENST00000611482 3087 ntBASIC14.5□□□□□ -0.09
SPASTQ9UBP0 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.49□□□□□ -0.09
SPASTQ9UBP0 VDAC1P1-201ENST00000439229 848 ntBASIC14.49□□□□□ -0.09
SPASTQ9UBP0 MAGEA5-201ENST00000446757 942 ntBASIC14.49□□□□□ -0.09
SPASTQ9UBP0 KLF2P1-201ENST00000447438 1042 ntBASIC14.49□□□□□ -0.09
SPASTQ9UBP0 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 CICP12-201ENST00000455801 843 ntBASIC14.49□□□□□ -0.09
SPASTQ9UBP0 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 AC009779.1-201ENST00000551138 283 ntBASIC14.49□□□□□ -0.09
SPASTQ9UBP0 AL160314.3-201ENST00000556041 767 ntBASIC14.49□□□□□ -0.09
SPASTQ9UBP0 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 AC005962.1-201ENST00000584100 773 ntBASIC14.49□□□□□ -0.09
SPASTQ9UBP0 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 C8orf49-201ENST00000525043 1968 ntBASIC14.49□□□□□ -0.09
SPASTQ9UBP0 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 MBLAC2-202ENST00000514906 1936 ntBASIC14.49□□□□□ -0.09
SPASTQ9UBP0 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPASTQ9UBP0 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 AC087386.2-201ENST00000623212 4637 ntBASIC14.48□□□□□ -0.09
SPASTQ9UBP0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 AC007274.2-201ENST00000421675 662 ntBASIC14.48□□□□□ -0.09
SPASTQ9UBP0 AL353637.1-201ENST00000451571 732 ntBASIC14.48□□□□□ -0.09
SPASTQ9UBP0 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 Z98259.2-201ENST00000641583 609 ntBASIC14.48□□□□□ -0.09
SPASTQ9UBP0 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.48□□□□□ -0.09
SPASTQ9UBP0 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.47□□□□□ -0.09
SPASTQ9UBP0 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms