Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC005912.2-201ENST00000619492 2400 ntBASIC16.19■□□□□ 0.18
COL20A1Q9P218 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL20A1Q9P218 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
COL20A1Q9P218 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
COL20A1Q9P218 BX640514.1-201ENST00000583223 1918 ntBASIC16.19■□□□□ 0.18
COL20A1Q9P218 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL20A1Q9P218 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.19■□□□□ 0.18
COL20A1Q9P218 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL20A1Q9P218 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
COL20A1Q9P218 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
COL20A1Q9P218 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
COL20A1Q9P218 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL20A1Q9P218 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL20A1Q9P218 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL20A1Q9P218 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.19■□□□□ 0.18
COL20A1Q9P218 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL20A1Q9P218 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COL20A1Q9P218 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL20A1Q9P218 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COL20A1Q9P218 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL20A1Q9P218 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.18■□□□□ 0.18
COL20A1Q9P218 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
COL20A1Q9P218 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
COL20A1Q9P218 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC16.18■□□□□ 0.18
COL20A1Q9P218 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COL20A1Q9P218 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL20A1Q9P218 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL20A1Q9P218 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL20A1Q9P218 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL20A1Q9P218 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COL20A1Q9P218 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL20A1Q9P218 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COL20A1Q9P218 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL20A1Q9P218 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL20A1Q9P218 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
COL20A1Q9P218 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.18■□□□□ 0.18
COL20A1Q9P218 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.18■□□□□ 0.18
COL20A1Q9P218 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC16.18■□□□□ 0.18
COL20A1Q9P218 RPL7P35-201ENST00000446943 740 ntBASIC16.18■□□□□ 0.18
COL20A1Q9P218 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COL20A1Q9P218 AP000911.2-201ENST00000534330 502 ntBASIC16.18■□□□□ 0.18
COL20A1Q9P218 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
COL20A1Q9P218 RN7SL455P-201ENST00000580629 282 ntBASIC16.18■□□□□ 0.18
COL20A1Q9P218 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC16.18■□□□□ 0.18
COL20A1Q9P218 MIR4649-201ENST00000582839 64 ntBASIC16.18■□□□□ 0.18
COL20A1Q9P218 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.18■□□□□ 0.18
COL20A1Q9P218 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.18■□□□□ 0.18
COL20A1Q9P218 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
COL20A1Q9P218 AC073911.3-201ENST00000624401 631 ntBASIC16.18■□□□□ 0.18
COL20A1Q9P218 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC16.18■□□□□ 0.18
COL20A1Q9P218 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL20A1Q9P218 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
COL20A1Q9P218 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
COL20A1Q9P218 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL20A1Q9P218 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COL20A1Q9P218 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL20A1Q9P218 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL20A1Q9P218 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL20A1Q9P218 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
COL20A1Q9P218 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
COL20A1Q9P218 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.18■□□□□ 0.18
COL20A1Q9P218 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL20A1Q9P218 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.18■□□□□ 0.18
COL20A1Q9P218 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
COL20A1Q9P218 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL20A1Q9P218 IL9RP3-201ENST00000442856 1674 ntBASIC16.18■□□□□ 0.18
COL20A1Q9P218 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
COL20A1Q9P218 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL20A1Q9P218 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.17■□□□□ 0.18
COL20A1Q9P218 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL20A1Q9P218 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL20A1Q9P218 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.17■□□□□ 0.18
COL20A1Q9P218 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC16.17■□□□□ 0.18
COL20A1Q9P218 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.17■□□□□ 0.18
COL20A1Q9P218 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COL20A1Q9P218 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
COL20A1Q9P218 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.17■□□□□ 0.18
COL20A1Q9P218 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL20A1Q9P218 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL20A1Q9P218 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COL20A1Q9P218 Z69890.1-201ENST00000382990 339 ntBASIC16.17■□□□□ 0.18
COL20A1Q9P218 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
COL20A1Q9P218 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COL20A1Q9P218 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC16.17■□□□□ 0.18
COL20A1Q9P218 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC16.17■□□□□ 0.18
COL20A1Q9P218 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.17■□□□□ 0.18
COL20A1Q9P218 RN7SL8P-201ENST00000461771 266 ntBASIC16.17■□□□□ 0.18
COL20A1Q9P218 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.17■□□□□ 0.18
COL20A1Q9P218 AC138701.2-201ENST00000553634 226 ntBASIC16.17■□□□□ 0.18
COL20A1Q9P218 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL20A1Q9P218 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.17■□□□□ 0.18
COL20A1Q9P218 AC007952.4-201ENST00000573866 637 ntBASIC16.17■□□□□ 0.18
COL20A1Q9P218 MIR2392-201ENST00000584881 84 ntBASIC16.17■□□□□ 0.18
COL20A1Q9P218 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.17■□□□□ 0.18
COL20A1Q9P218 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
COL20A1Q9P218 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.17■□□□□ 0.18
COL20A1Q9P218 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL20A1Q9P218 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.17■□□□□ 0.18
COL20A1Q9P218 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.17■□□□□ 0.18
COL20A1Q9P218 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms