Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 REXO1L6P-201ENST00000603433 1515 ntBASIC14.3□□□□□ -0.12
MKS1Q9NXB0 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC14.3□□□□□ -0.12
MKS1Q9NXB0 LINC01165-201ENST00000445190 1623 ntBASIC14.3□□□□□ -0.12
MKS1Q9NXB0 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MKS1Q9NXB0 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 AC093214.1-201ENST00000511688 1107 ntBASIC14.29□□□□□ -0.12
MKS1Q9NXB0 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 JPT2-214ENST00000569765 782 ntTSL 2 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 AC005498.2-205ENST00000593218 784 ntBASIC14.29□□□□□ -0.12
MKS1Q9NXB0 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 AL365181.3-201ENST00000605886 3222 ntBASIC14.29□□□□□ -0.12
MKS1Q9NXB0 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 SALL4P6-201ENST00000429385 1691 ntBASIC14.29□□□□□ -0.12
MKS1Q9NXB0 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 AC010970.1-201ENST00000445125 1848 ntBASIC14.29□□□□□ -0.12
MKS1Q9NXB0 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 AP000437.1-201ENST00000624057 2085 ntBASIC14.29□□□□□ -0.12
MKS1Q9NXB0 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
MKS1Q9NXB0 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms