Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 AKAP8P1-201ENST00000434743 1349 ntBASIC17.4■□□□□ 0.38
RTN4Q9NQC3 CDV3-209ENST00000515421 1305 ntTSL 3 BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 TDGF1-201ENST00000296145 2513 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
RTN4Q9NQC3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RTN4Q9NQC3 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RTN4Q9NQC3 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 RWDD4P1-201ENST00000488019 565 ntBASIC17.39■□□□□ 0.37
RTN4Q9NQC3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 AC026333.4-201ENST00000613543 544 ntBASIC17.39■□□□□ 0.37
RTN4Q9NQC3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 AL122035.2-201ENST00000609125 1870 ntBASIC17.39■□□□□ 0.37
RTN4Q9NQC3 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.39■□□□□ 0.37
RTN4Q9NQC3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 CCNG2-205ENST00000509972 1549 ntTSL 2 BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 AIG1-201ENST00000275235 1202 ntTSL 2 BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 AL645939.2-201ENST00000427340 991 ntBASIC17.38■□□□□ 0.37
RTN4Q9NQC3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 RPL13AP23-201ENST00000480739 586 ntBASIC17.38■□□□□ 0.37
RTN4Q9NQC3 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 ETFRF1-209ENST00000556885 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 AL805961.1-203ENST00000641078 1258 ntBASIC17.38■□□□□ 0.37
RTN4Q9NQC3 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.38■□□□□ 0.37
RTN4Q9NQC3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 SLC45A3-201ENST00000367145 3341 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms