Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 AC004967.1-201ENST00000453589 447 ntBASIC17.87■□□□□ 0.45
UPF2Q9HAU5 FO681548.1-201ENST00000455617 1132 ntBASIC17.87■□□□□ 0.45
UPF2Q9HAU5 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 AC104596.2-201ENST00000512793 793 ntBASIC17.87■□□□□ 0.45
UPF2Q9HAU5 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 AC104794.3-201ENST00000566840 1248 ntBASIC17.87■□□□□ 0.45
UPF2Q9HAU5 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 AL805961.2-201ENST00000642139 4817 ntBASIC17.87■□□□□ 0.45
UPF2Q9HAU5 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC17.87■□□□□ 0.45
UPF2Q9HAU5 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 AC004241.5-201ENST00000623870 2448 ntBASIC17.86■□□□□ 0.45
UPF2Q9HAU5 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 MIR943-201ENST00000401286 94 ntBASIC17.86■□□□□ 0.45
UPF2Q9HAU5 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 AP005019.2-201ENST00000615104 511 ntBASIC17.86■□□□□ 0.45
UPF2Q9HAU5 AP001002.3-201ENST00000623482 206 ntBASIC17.86■□□□□ 0.45
UPF2Q9HAU5 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UPF2Q9HAU5 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms