Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.89■□□□□ 0.29
EFCC1Q9HA90 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.89■□□□□ 0.29
EFCC1Q9HA90 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
EFCC1Q9HA90 AC131206.1-201ENST00000538078 1211 ntBASIC16.89■□□□□ 0.29
EFCC1Q9HA90 AC027237.1-201ENST00000560942 655 ntBASIC16.89■□□□□ 0.29
EFCC1Q9HA90 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC16.89■□□□□ 0.29
EFCC1Q9HA90 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.89■□□□□ 0.29
EFCC1Q9HA90 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
EFCC1Q9HA90 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.89■□□□□ 0.29
EFCC1Q9HA90 AC002472.4-201ENST00000641915 272 ntBASIC16.89■□□□□ 0.29
EFCC1Q9HA90 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
EFCC1Q9HA90 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.89■□□□□ 0.29
EFCC1Q9HA90 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EFCC1Q9HA90 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EFCC1Q9HA90 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EFCC1Q9HA90 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EFCC1Q9HA90 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.89■□□□□ 0.29
EFCC1Q9HA90 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EFCC1Q9HA90 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EFCC1Q9HA90 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EFCC1Q9HA90 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 AC114947.1-202ENST00000514136 344 ntBASIC16.88■□□□□ 0.29
EFCC1Q9HA90 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 AC133540.1-201ENST00000620845 1019 ntBASIC16.88■□□□□ 0.29
EFCC1Q9HA90 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 PPT1-215ENST00000641471 2368 ntBASIC16.88■□□□□ 0.29
EFCC1Q9HA90 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 AC087481.3-201ENST00000602886 1894 ntBASIC16.88■□□□□ 0.29
EFCC1Q9HA90 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFCC1Q9HA90 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EFCC1Q9HA90 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
EFCC1Q9HA90 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.87■□□□□ 0.29
EFCC1Q9HA90 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
EFCC1Q9HA90 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
EFCC1Q9HA90 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.87■□□□□ 0.29
EFCC1Q9HA90 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EFCC1Q9HA90 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EFCC1Q9HA90 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
EFCC1Q9HA90 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
EFCC1Q9HA90 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EFCC1Q9HA90 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.87■□□□□ 0.29
EFCC1Q9HA90 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EFCC1Q9HA90 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EFCC1Q9HA90 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EFCC1Q9HA90 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EFCC1Q9HA90 AC020658.6-201ENST00000623564 1870 ntBASIC16.87■□□□□ 0.29
EFCC1Q9HA90 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EFCC1Q9HA90 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.87■□□□□ 0.29
EFCC1Q9HA90 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EFCC1Q9HA90 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EFCC1Q9HA90 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.87■□□□□ 0.29
EFCC1Q9HA90 HLA-DMA-203ENST00000395305 777 ntBASIC16.87■□□□□ 0.29
EFCC1Q9HA90 AL035414.1-201ENST00000451327 857 ntBASIC16.87■□□□□ 0.29
EFCC1Q9HA90 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
EFCC1Q9HA90 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC16.87■□□□□ 0.29
EFCC1Q9HA90 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.87■□□□□ 0.29
EFCC1Q9HA90 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms