Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 FP236241.2-201ENST00000624906 1185 ntBASIC14.75□□□□□ -0.05
TRIM55Q9BYV6 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.75□□□□□ -0.05
TRIM55Q9BYV6 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM55Q9BYV6 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM55Q9BYV6 AC011840.2-201ENST00000563063 1520 ntBASIC14.75□□□□□ -0.05
TRIM55Q9BYV6 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM55Q9BYV6 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TRIM55Q9BYV6 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRIM55Q9BYV6 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.75□□□□□ -0.05
TRIM55Q9BYV6 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRIM55Q9BYV6 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TRIM55Q9BYV6 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM55Q9BYV6 AL731571.1-201ENST00000617058 5428 ntBASIC14.75□□□□□ -0.05
TRIM55Q9BYV6 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM55Q9BYV6 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.75□□□□□ -0.05
TRIM55Q9BYV6 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 CTBP2P5-201ENST00000454986 1264 ntBASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 PDIA3P1-201ENST00000471856 1510 ntBASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM55Q9BYV6 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 AC093525.8-201ENST00000624099 1342 ntBASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 MYADML-201ENST00000474610 2147 ntBASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms