Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC11.08□□□□□ -0.64
VGLL1Q99990 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
VGLL1Q99990 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
VGLL1Q99990 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC11.08□□□□□ -0.64
VGLL1Q99990 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 APOA1-205ENST00000375329 927 ntTSL 2 BASIC11.08□□□□□ -0.64
VGLL1Q99990 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 BASP1P1-201ENST00000430708 665 ntBASIC11.08□□□□□ -0.64
VGLL1Q99990 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC11.08□□□□□ -0.64
VGLL1Q99990 AC093004.1-201ENST00000508850 424 ntBASIC11.08□□□□□ -0.64
VGLL1Q99990 GCOM2-201ENST00000509133 1104 ntBASIC11.08□□□□□ -0.64
VGLL1Q99990 AC093214.1-201ENST00000511688 1107 ntBASIC11.08□□□□□ -0.64
VGLL1Q99990 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC11.08□□□□□ -0.64
VGLL1Q99990 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC11.08□□□□□ -0.64
VGLL1Q99990 AC092552.1-201ENST00000547243 906 ntBASIC11.08□□□□□ -0.64
VGLL1Q99990 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC11.08□□□□□ -0.64
VGLL1Q99990 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 AC093726.1-201ENST00000608064 963 ntBASIC11.08□□□□□ -0.64
VGLL1Q99990 AC099568.2-201ENST00000609194 695 ntBASIC11.08□□□□□ -0.64
VGLL1Q99990 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
VGLL1Q99990 ORC5-208ENST00000626700 344 ntTSL 3 BASIC11.08□□□□□ -0.64
VGLL1Q99990 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
VGLL1Q99990 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC11.08□□□□□ -0.64
VGLL1Q99990 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
VGLL1Q99990 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC11.08□□□□□ -0.64
VGLL1Q99990 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
VGLL1Q99990 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC11.08□□□□□ -0.64
VGLL1Q99990 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
VGLL1Q99990 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 AL157996.1-201ENST00000624684 2299 ntBASIC11.07□□□□□ -0.64
VGLL1Q99990 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC11.07□□□□□ -0.64
VGLL1Q99990 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC11.07□□□□□ -0.64
VGLL1Q99990 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
VGLL1Q99990 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 RN7SKP230-201ENST00000365642 335 ntBASIC11.07□□□□□ -0.64
VGLL1Q99990 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 ACTBP8-201ENST00000403258 1108 ntBASIC11.07□□□□□ -0.64
VGLL1Q99990 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC11.07□□□□□ -0.64
VGLL1Q99990 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC11.07□□□□□ -0.64
VGLL1Q99990 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC11.07□□□□□ -0.64
VGLL1Q99990 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC11.07□□□□□ -0.64
VGLL1Q99990 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC11.07□□□□□ -0.64
VGLL1Q99990 HNRNPA1P13-201ENST00000510646 963 ntBASIC11.07□□□□□ -0.64
VGLL1Q99990 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC11.07□□□□□ -0.64
VGLL1Q99990 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
VGLL1Q99990 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC11.07□□□□□ -0.64
VGLL1Q99990 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC11.07□□□□□ -0.64
VGLL1Q99990 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
VGLL1Q99990 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC11.07□□□□□ -0.64
VGLL1Q99990 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC11.07□□□□□ -0.64
VGLL1Q99990 AC133539.2-201ENST00000604757 467 ntBASIC11.07□□□□□ -0.64
VGLL1Q99990 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 AC106028.4-201ENST00000614509 607 ntBASIC11.07□□□□□ -0.64
VGLL1Q99990 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC11.07□□□□□ -0.64
VGLL1Q99990 AC005252.2-201ENST00000624630 1141 ntBASIC11.07□□□□□ -0.64
VGLL1Q99990 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
VGLL1Q99990 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC11.07□□□□□ -0.64
VGLL1Q99990 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms