Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 RN7SKP230-201ENST00000365642 335 ntBASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 C1QBPP1-201ENST00000400117 770 ntBASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 TSEN15P1-201ENST00000423257 515 ntBASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 AC009407.1-201ENST00000568958 598 ntBASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 KRT18P8-201ENST00000581937 1246 ntBASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 AC004466.1-201ENST00000599515 1080 ntBASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 AL390955.2-201ENST00000603032 514 ntBASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NSMCE2Q96MF7 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 TREML5P-201ENST00000421694 576 ntBASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 AC241585.1-201ENST00000433527 519 ntBASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 AC025678.2-201ENST00000562061 970 ntBASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 AL590440.2-201ENST00000641973 1595 ntBASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 BEND3P3-201ENST00000611030 2440 ntBASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NSMCE2Q96MF7 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms