Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 TNN-203ENST00000622870 3719 ntTSL 5 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 NCR3-202ENST00000376071 541 ntTSL 5 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 TSPY25P-201ENST00000429463 745 ntBASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 AL161932.2-201ENST00000435436 679 ntBASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 AC090386.2-201ENST00000623010 1039 ntBASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 DDX5-235ENST00000630471 473 ntTSL 4 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 AC064801.2-201ENST00000625052 1303 ntBASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 AL513477.1-201ENST00000602865 2407 ntBASIC11.23□□□□□ -0.61
UBE2E2Q96LR5 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 DMBT1P1-203ENST00000636837 4628 ntBASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 OR2R1P-201ENST00000441404 914 ntBASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 MSRA-203ENST00000441698 788 ntTSL 2 BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 AL596276.2-201ENST00000447525 331 ntBASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 AL353637.1-201ENST00000451571 732 ntBASIC11.22□□□□□ -0.61
UBE2E2Q96LR5 IGHJ2P-201ENST00000454480 60 ntBASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms