Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RFT1Q96AA3 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
RFT1Q96AA3 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RFT1Q96AA3 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RFT1Q96AA3 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RFT1Q96AA3 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RFT1Q96AA3 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RFT1Q96AA3 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.94□□□□□ -0.34
RFT1Q96AA3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RFT1Q96AA3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RFT1Q96AA3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RFT1Q96AA3 CES1P1-201ENST00000421606 1704 ntBASIC12.93□□□□□ -0.34
RFT1Q96AA3 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RFT1Q96AA3 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RFT1Q96AA3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.93□□□□□ -0.34
RFT1Q96AA3 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RFT1Q96AA3 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.93□□□□□ -0.34
RFT1Q96AA3 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.93□□□□□ -0.34
RFT1Q96AA3 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
RFT1Q96AA3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.93□□□□□ -0.34
RFT1Q96AA3 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RFT1Q96AA3 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RFT1Q96AA3 AC090643.2-201ENST00000623442 2029 ntBASIC12.93□□□□□ -0.34
RFT1Q96AA3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RFT1Q96AA3 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RFT1Q96AA3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RFT1Q96AA3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RFT1Q96AA3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RFT1Q96AA3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
RFT1Q96AA3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RFT1Q96AA3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.93□□□□□ -0.34
RFT1Q96AA3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RFT1Q96AA3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RFT1Q96AA3 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.93□□□□□ -0.34
RFT1Q96AA3 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.93□□□□□ -0.34
RFT1Q96AA3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RFT1Q96AA3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.93□□□□□ -0.34
RFT1Q96AA3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.93□□□□□ -0.34
RFT1Q96AA3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RFT1Q96AA3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.93□□□□□ -0.34
RFT1Q96AA3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.93□□□□□ -0.34
RFT1Q96AA3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.93□□□□□ -0.34
RFT1Q96AA3 AL662799.1-202ENST00000614205 422 ntBASIC12.93□□□□□ -0.34
RFT1Q96AA3 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RFT1Q96AA3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RFT1Q96AA3 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.93□□□□□ -0.34
RFT1Q96AA3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.93□□□□□ -0.34
RFT1Q96AA3 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.93□□□□□ -0.34
RFT1Q96AA3 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RFT1Q96AA3 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
RFT1Q96AA3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
RFT1Q96AA3 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.93□□□□□ -0.34
RFT1Q96AA3 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.93□□□□□ -0.34
RFT1Q96AA3 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RFT1Q96AA3 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.93□□□□□ -0.34
RFT1Q96AA3 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RFT1Q96AA3 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RFT1Q96AA3 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RFT1Q96AA3 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RFT1Q96AA3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RFT1Q96AA3 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.93□□□□□ -0.34
RFT1Q96AA3 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RFT1Q96AA3 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RFT1Q96AA3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RFT1Q96AA3 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RFT1Q96AA3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RFT1Q96AA3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RFT1Q96AA3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
RFT1Q96AA3 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RFT1Q96AA3 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RFT1Q96AA3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RFT1Q96AA3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RFT1Q96AA3 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
RFT1Q96AA3 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RFT1Q96AA3 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.92□□□□□ -0.34
RFT1Q96AA3 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RFT1Q96AA3 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RFT1Q96AA3 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RFT1Q96AA3 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.92□□□□□ -0.34
RFT1Q96AA3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RFT1Q96AA3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RFT1Q96AA3 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RFT1Q96AA3 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RFT1Q96AA3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RFT1Q96AA3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.92□□□□□ -0.34
RFT1Q96AA3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RFT1Q96AA3 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.92□□□□□ -0.34
RFT1Q96AA3 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms