Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
ARHGEF40Q8TER5 KLK8-203ENST00000347619 555 ntTSL 2 BASIC20.58■□□□□ 0.88
ARHGEF40Q8TER5 AL121994.1-201ENST00000413189 402 ntBASIC20.58■□□□□ 0.88
ARHGEF40Q8TER5 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC20.58■□□□□ 0.88
ARHGEF40Q8TER5 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARHGEF40Q8TER5 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC20.58■□□□□ 0.88
ARHGEF40Q8TER5 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC20.58■□□□□ 0.88
ARHGEF40Q8TER5 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC20.58■□□□□ 0.88
ARHGEF40Q8TER5 SNORA50D-202ENST00000627561 132 ntBASIC20.58■□□□□ 0.88
ARHGEF40Q8TER5 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARHGEF40Q8TER5 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 AC007881.1-201ENST00000437460 187 ntBASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 RNF7-205ENST00000480908 782 ntTSL 4 BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF40Q8TER5 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 PPP1R2P10-201ENST00000393023 595 ntBASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 DUX4L31-201ENST00000446466 1136 ntBASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF40Q8TER5 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 MIR193A-201ENST00000384882 88 ntBASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 RBPMSLP-201ENST00000433427 502 ntBASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 RPL10P8-201ENST00000522888 313 ntBASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF40Q8TER5 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms