Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NUP35Q8NFH5 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
NUP35Q8NFH5 GHET1-201ENST00000627071 1906 ntBASIC10.87□□□□□ -0.67
NUP35Q8NFH5 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
NUP35Q8NFH5 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NUP35Q8NFH5 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NUP35Q8NFH5 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
NUP35Q8NFH5 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
NUP35Q8NFH5 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC10.87□□□□□ -0.67
NUP35Q8NFH5 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC10.87□□□□□ -0.67
NUP35Q8NFH5 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC10.87□□□□□ -0.67
NUP35Q8NFH5 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC10.87□□□□□ -0.67
NUP35Q8NFH5 AL022313.4-201ENST00000562756 2046 ntBASIC10.87□□□□□ -0.67
NUP35Q8NFH5 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NUP35Q8NFH5 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NUP35Q8NFH5 AP003969.2-201ENST00000623739 2275 ntBASIC10.87□□□□□ -0.67
NUP35Q8NFH5 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NUP35Q8NFH5 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NUP35Q8NFH5 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NUP35Q8NFH5 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NUP35Q8NFH5 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC10.87□□□□□ -0.67
NUP35Q8NFH5 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NUP35Q8NFH5 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
NUP35Q8NFH5 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NUP35Q8NFH5 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
NUP35Q8NFH5 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NUP35Q8NFH5 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NUP35Q8NFH5 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 TUBB3P1-201ENST00000405796 1332 ntBASIC10.86□□□□□ -0.67
NUP35Q8NFH5 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 AC022400.8-201ENST00000623453 3599 ntBASIC10.86□□□□□ -0.67
NUP35Q8NFH5 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 AGGF1P10-201ENST00000635005 2191 ntBASIC10.86□□□□□ -0.67
NUP35Q8NFH5 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 AC131206.1-201ENST00000538078 1211 ntBASIC10.86□□□□□ -0.67
NUP35Q8NFH5 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 AL662844.1-201ENST00000546340 181 ntBASIC10.86□□□□□ -0.67
NUP35Q8NFH5 AC103988.2-201ENST00000561804 725 ntBASIC10.86□□□□□ -0.67
NUP35Q8NFH5 AP001005.1-201ENST00000571755 1248 ntBASIC10.86□□□□□ -0.67
NUP35Q8NFH5 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 AC004461.2-201ENST00000629517 803 ntBASIC10.86□□□□□ -0.67
NUP35Q8NFH5 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 ABCD1P2-201ENST00000429313 1601 ntBASIC10.86□□□□□ -0.67
NUP35Q8NFH5 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 AL645937.6-201ENST00000641122 3727 ntBASIC10.86□□□□□ -0.67
NUP35Q8NFH5 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms