Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AL512430.1-201ENST00000392575 860 ntBASIC16.13■□□□□ 0.17
TRIM50Q86XT4 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 RPS9P1-201ENST00000419943 583 ntBASIC16.13■□□□□ 0.17
TRIM50Q86XT4 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 AC078991.1-201ENST00000437297 610 ntBASIC16.13■□□□□ 0.17
TRIM50Q86XT4 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 AC008267.1-201ENST00000474858 1069 ntBASIC16.13■□□□□ 0.17
TRIM50Q86XT4 RN7SL530P-201ENST00000485097 298 ntBASIC16.13■□□□□ 0.17
TRIM50Q86XT4 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 AC007326.1-201ENST00000604539 458 ntBASIC16.13■□□□□ 0.17
TRIM50Q86XT4 AC103810.10-201ENST00000606504 343 ntBASIC16.13■□□□□ 0.17
TRIM50Q86XT4 AC007881.3-201ENST00000608897 607 ntBASIC16.13■□□□□ 0.17
TRIM50Q86XT4 AC242376.2-201ENST00000619355 883 ntBASIC16.13■□□□□ 0.17
TRIM50Q86XT4 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 AC074138.1-201ENST00000611182 1303 ntBASIC16.13■□□□□ 0.17
TRIM50Q86XT4 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 AL807761.2-201ENST00000422849 729 ntBASIC16.12■□□□□ 0.17
TRIM50Q86XT4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 SIGLEC18P-201ENST00000602271 909 ntBASIC16.12■□□□□ 0.17
TRIM50Q86XT4 AC092171.5-201ENST00000608012 942 ntBASIC16.12■□□□□ 0.17
TRIM50Q86XT4 MIR7845-201ENST00000618396 99 ntBASIC16.12■□□□□ 0.17
TRIM50Q86XT4 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM50Q86XT4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 KRT8P31-201ENST00000504812 1408 ntBASIC16.11■□□□□ 0.17
TRIM50Q86XT4 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 INTS4P1-203ENST00000641008 3683 ntBASIC16.11■□□□□ 0.17
TRIM50Q86XT4 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms