Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 AC006453.1-201ENST00000636037 1257 ntBASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
H3F3CQ6NXT2 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 AC018529.2-202ENST00000611482 3087 ntBASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 TSPY25P-201ENST00000429463 745 ntBASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 AC234782.1-201ENST00000451950 919 ntBASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 AC124068.2-201ENST00000569473 1109 ntBASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3F3CQ6NXT2 AL354702.1-201ENST00000442006 1960 ntBASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms