Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 HIST2H2BB-201ENST00000449108 381 ntBASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 DUX4L46-201ENST00000566845 751 ntBASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 BTNL10-201ENST00000595971 695 ntBASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 MIR6720-201ENST00000611664 98 ntBASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 AL365181.3-201ENST00000605886 3222 ntBASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 ABCD1P2-201ENST00000429313 1601 ntBASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 MIR1202-201ENST00000408529 83 ntBASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 TTTY23B-201ENST00000442790 549 ntBASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 AC007551.1-201ENST00000457394 519 ntBASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 AC025048.6-201ENST00000634326 1161 ntBASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 CCT8L1P-201ENST00000465400 1674 ntBASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKAL1Q5VV42 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDKAL1Q5VV42 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDKAL1Q5VV42 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CDKAL1Q5VV42 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CDKAL1Q5VV42 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDKAL1Q5VV42 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDKAL1Q5VV42 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CDKAL1Q5VV42 AC007952.5-201ENST00000572818 1486 ntBASIC15.78■□□□□ 0.12
CDKAL1Q5VV42 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDKAL1Q5VV42 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CDKAL1Q5VV42 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDKAL1Q5VV42 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDKAL1Q5VV42 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDKAL1Q5VV42 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDKAL1Q5VV42 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDKAL1Q5VV42 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDKAL1Q5VV42 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CDKAL1Q5VV42 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDKAL1Q5VV42 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.78■□□□□ 0.12
CDKAL1Q5VV42 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDKAL1Q5VV42 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDKAL1Q5VV42 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms