Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
VPS13DQ5THJ4 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
VPS13DQ5THJ4 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
VPS13DQ5THJ4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
VPS13DQ5THJ4 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC9.34□□□□□ -0.91
VPS13DQ5THJ4 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC9.34□□□□□ -0.91
VPS13DQ5THJ4 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
VPS13DQ5THJ4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
VPS13DQ5THJ4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
VPS13DQ5THJ4 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
VPS13DQ5THJ4 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
VPS13DQ5THJ4 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC9.34□□□□□ -0.91
VPS13DQ5THJ4 AC104640.1-201ENST00000562617 2109 ntBASIC9.34□□□□□ -0.91
VPS13DQ5THJ4 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
VPS13DQ5THJ4 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
VPS13DQ5THJ4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
VPS13DQ5THJ4 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
VPS13DQ5THJ4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
VPS13DQ5THJ4 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC9.34□□□□□ -0.91
VPS13DQ5THJ4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
VPS13DQ5THJ4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC9.34□□□□□ -0.91
VPS13DQ5THJ4 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
VPS13DQ5THJ4 AL513477.1-201ENST00000602865 2407 ntBASIC9.34□□□□□ -0.91
VPS13DQ5THJ4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
VPS13DQ5THJ4 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
VPS13DQ5THJ4 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
VPS13DQ5THJ4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 SNU13-204ENST00000402458 462 ntTSL 3 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 RHOQP2-201ENST00000449922 579 ntBASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 PTN-202ENST00000393083 1599 ntTSL 5 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 RN7SL76P-201ENST00000482435 289 ntBASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 ACY3-202ENST00000529256 933 ntTSL 3 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 SRP14-208ENST00000560773 468 ntTSL 3 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 AL357143.1-203ENST00000639750 881 ntBASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 AL031590.1-202ENST00000641466 1737 ntBASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 TKT-201ENST00000296289 1931 ntTSL 5 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 STK16-202ENST00000409260 1493 ntTSL 5 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 ABCD1P4-201ENST00000399687 604 ntBASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 RN7SL602P-201ENST00000578326 324 ntBASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 RN7SL718P-201ENST00000581254 303 ntBASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC9.33□□□□□ -0.92
VPS13DQ5THJ4 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms