Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.6■□□□□ 0.25
USH1GQ495M9 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
USH1GQ495M9 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.6■□□□□ 0.25
USH1GQ495M9 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.6■□□□□ 0.25
USH1GQ495M9 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.6■□□□□ 0.25
USH1GQ495M9 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
USH1GQ495M9 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.6■□□□□ 0.25
USH1GQ495M9 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USH1GQ495M9 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
USH1GQ495M9 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USH1GQ495M9 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.6■□□□□ 0.25
USH1GQ495M9 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
USH1GQ495M9 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.6■□□□□ 0.25
USH1GQ495M9 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
USH1GQ495M9 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
USH1GQ495M9 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
USH1GQ495M9 LINC00552-201ENST00000625151 2579 ntBASIC16.6■□□□□ 0.25
USH1GQ495M9 LAP3P2-201ENST00000454686 1454 ntBASIC16.6■□□□□ 0.25
USH1GQ495M9 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USH1GQ495M9 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
USH1GQ495M9 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USH1GQ495M9 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
USH1GQ495M9 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
USH1GQ495M9 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
USH1GQ495M9 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USH1GQ495M9 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USH1GQ495M9 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USH1GQ495M9 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
USH1GQ495M9 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
USH1GQ495M9 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
USH1GQ495M9 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
USH1GQ495M9 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USH1GQ495M9 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USH1GQ495M9 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
USH1GQ495M9 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.59■□□□□ 0.25
USH1GQ495M9 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USH1GQ495M9 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
USH1GQ495M9 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.59■□□□□ 0.25
USH1GQ495M9 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
USH1GQ495M9 HINT2P1-201ENST00000419438 481 ntBASIC16.59■□□□□ 0.25
USH1GQ495M9 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.59■□□□□ 0.25
USH1GQ495M9 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.59■□□□□ 0.25
USH1GQ495M9 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.59■□□□□ 0.25
USH1GQ495M9 AC090386.2-201ENST00000623010 1039 ntBASIC16.59■□□□□ 0.25
USH1GQ495M9 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USH1GQ495M9 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.59■□□□□ 0.25
USH1GQ495M9 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.59■□□□□ 0.25
USH1GQ495M9 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USH1GQ495M9 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USH1GQ495M9 FAM90A2P-201ENST00000511144 1395 ntBASIC16.59■□□□□ 0.25
USH1GQ495M9 FAM90A25P-201ENST00000528404 1395 ntBASIC16.59■□□□□ 0.25
USH1GQ495M9 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
USH1GQ495M9 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
USH1GQ495M9 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
USH1GQ495M9 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USH1GQ495M9 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
USH1GQ495M9 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
USH1GQ495M9 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
USH1GQ495M9 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
USH1GQ495M9 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.59■□□□□ 0.25
USH1GQ495M9 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
USH1GQ495M9 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
USH1GQ495M9 OR2I1P-210ENST00000642037 4691 ntBASIC16.58■□□□□ 0.25
USH1GQ495M9 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
USH1GQ495M9 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
USH1GQ495M9 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.58■□□□□ 0.25
USH1GQ495M9 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
USH1GQ495M9 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
USH1GQ495M9 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
USH1GQ495M9 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
USH1GQ495M9 AL583805.1-201ENST00000391389 531 ntBASIC16.58■□□□□ 0.24
USH1GQ495M9 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
USH1GQ495M9 AC092506.1-202ENST00000401022 528 ntBASIC16.58■□□□□ 0.24
USH1GQ495M9 BANF1P3-201ENST00000412556 261 ntBASIC16.58■□□□□ 0.24
USH1GQ495M9 RPS9P1-201ENST00000419943 583 ntBASIC16.58■□□□□ 0.24
USH1GQ495M9 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
USH1GQ495M9 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.58■□□□□ 0.24
USH1GQ495M9 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
USH1GQ495M9 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.58■□□□□ 0.24
USH1GQ495M9 MIR3677-201ENST00000578964 60 ntBASIC16.58■□□□□ 0.24
USH1GQ495M9 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.58■□□□□ 0.24
USH1GQ495M9 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
USH1GQ495M9 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.58■□□□□ 0.24
USH1GQ495M9 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.58■□□□□ 0.24
USH1GQ495M9 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USH1GQ495M9 AL353726.2-201ENST00000623259 884 ntBASIC16.58■□□□□ 0.24
USH1GQ495M9 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USH1GQ495M9 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USH1GQ495M9 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
USH1GQ495M9 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USH1GQ495M9 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USH1GQ495M9 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
USH1GQ495M9 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
USH1GQ495M9 RN7SL832P-201ENST00000607781 1756 ntBASIC16.58■□□□□ 0.24
USH1GQ495M9 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USH1GQ495M9 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
USH1GQ495M9 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
USH1GQ495M9 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USH1GQ495M9 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
USH1GQ495M9 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms