Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 AL133466.1-201ENST00000447582 150 ntBASIC15.21■□□□□ 0.03
IRX4P78413 TMEM198B-204ENST00000484016 896 ntBASIC15.21■□□□□ 0.03
IRX4P78413 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IRX4P78413 COX5BP1-201ENST00000507622 393 ntBASIC15.21■□□□□ 0.03
IRX4P78413 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.21■□□□□ 0.03
IRX4P78413 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.21■□□□□ 0.03
IRX4P78413 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.21■□□□□ 0.03
IRX4P78413 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IRX4P78413 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
IRX4P78413 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.21■□□□□ 0.03
IRX4P78413 AC091812.3-201ENST00000621362 345 ntBASIC15.21■□□□□ 0.03
IRX4P78413 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IRX4P78413 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IRX4P78413 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IRX4P78413 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.21■□□□□ 0.03
IRX4P78413 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IRX4P78413 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IRX4P78413 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
IRX4P78413 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IRX4P78413 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IRX4P78413 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
IRX4P78413 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IRX4P78413 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
IRX4P78413 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
IRX4P78413 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
IRX4P78413 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
IRX4P78413 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
IRX4P78413 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
IRX4P78413 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
IRX4P78413 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
IRX4P78413 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
IRX4P78413 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IRX4P78413 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IRX4P78413 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
IRX4P78413 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IRX4P78413 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IRX4P78413 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
IRX4P78413 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
IRX4P78413 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IRX4P78413 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
IRX4P78413 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IRX4P78413 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
IRX4P78413 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IRX4P78413 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC15.2■□□□□ 0.02
IRX4P78413 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.2■□□□□ 0.02
IRX4P78413 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IRX4P78413 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IRX4P78413 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IRX4P78413 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
IRX4P78413 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IRX4P78413 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC15.2■□□□□ 0.02
IRX4P78413 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IRX4P78413 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IRX4P78413 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IRX4P78413 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IRX4P78413 KLF2P2-201ENST00000416807 1039 ntBASIC15.2■□□□□ 0.02
IRX4P78413 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.2■□□□□ 0.02
IRX4P78413 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.2■□□□□ 0.02
IRX4P78413 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.2■□□□□ 0.02
IRX4P78413 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
IRX4P78413 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.2■□□□□ 0.02
IRX4P78413 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IRX4P78413 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.2■□□□□ 0.02
IRX4P78413 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.2■□□□□ 0.02
IRX4P78413 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.2■□□□□ 0.02
IRX4P78413 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.2■□□□□ 0.02
IRX4P78413 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
IRX4P78413 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.2■□□□□ 0.02
IRX4P78413 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.2■□□□□ 0.02
IRX4P78413 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.2■□□□□ 0.02
IRX4P78413 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.2■□□□□ 0.02
IRX4P78413 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.2■□□□□ 0.02
IRX4P78413 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.2■□□□□ 0.02
IRX4P78413 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.2■□□□□ 0.02
IRX4P78413 AC007663.3-201ENST00000609632 465 ntBASIC15.2■□□□□ 0.02
IRX4P78413 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.2■□□□□ 0.02
IRX4P78413 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IRX4P78413 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.2■□□□□ 0.02
IRX4P78413 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.2■□□□□ 0.02
IRX4P78413 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IRX4P78413 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
IRX4P78413 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
IRX4P78413 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IRX4P78413 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.2■□□□□ 0.02
IRX4P78413 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IRX4P78413 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
IRX4P78413 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IRX4P78413 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.2■□□□□ 0.02
IRX4P78413 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.19■□□□□ 0.02
IRX4P78413 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
IRX4P78413 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
IRX4P78413 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
IRX4P78413 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IRX4P78413 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IRX4P78413 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IRX4P78413 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IRX4P78413 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.19■□□□□ 0.02
IRX4P78413 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
IRX4P78413 AL031595.1-201ENST00000623969 4709 ntBASIC15.19■□□□□ 0.02
IRX4P78413 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms