Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCNA1P78396 AQP7P4-201ENST00000447083 1042 ntBASIC16.32■□□□□ 0.2
CCNA1P78396 AQP7P2-201ENST00000453967 1041 ntBASIC16.32■□□□□ 0.2
CCNA1P78396 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.32■□□□□ 0.2
CCNA1P78396 PPIA-208ENST00000489459 907 ntTSL 2 BASIC16.32■□□□□ 0.2
CCNA1P78396 AC093909.3-201ENST00000504783 336 ntBASIC16.32■□□□□ 0.2
CCNA1P78396 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.32■□□□□ 0.2
CCNA1P78396 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC16.32■□□□□ 0.2
CCNA1P78396 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.32■□□□□ 0.2
CCNA1P78396 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCNA1P78396 KRT8P2-201ENST00000556193 944 ntBASIC16.32■□□□□ 0.2
CCNA1P78396 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC16.32■□□□□ 0.2
CCNA1P78396 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.32■□□□□ 0.2
CCNA1P78396 AC104506.1-201ENST00000609247 429 ntBASIC16.32■□□□□ 0.2
CCNA1P78396 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC16.32■□□□□ 0.2
CCNA1P78396 MIR6074-201ENST00000612054 107 ntBASIC16.32■□□□□ 0.2
CCNA1P78396 PPIA-210ENST00000620047 827 ntTSL 5 BASIC16.32■□□□□ 0.2
CCNA1P78396 MIR6746-201ENST00000620971 63 ntBASIC16.32■□□□□ 0.2
CCNA1P78396 AC067931.2-201ENST00000623655 2003 ntBASIC16.32■□□□□ 0.2
CCNA1P78396 AQP7P3-201ENST00000624547 1041 ntBASIC16.32■□□□□ 0.2
CCNA1P78396 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.32■□□□□ 0.2
CCNA1P78396 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
CCNA1P78396 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNA1P78396 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNA1P78396 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNA1P78396 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNA1P78396 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCNA1P78396 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA1P78396 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.31■□□□□ 0.2
CCNA1P78396 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.31■□□□□ 0.2
CCNA1P78396 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA1P78396 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA1P78396 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCNA1P78396 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA1P78396 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA1P78396 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA1P78396 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC16.31■□□□□ 0.2
CCNA1P78396 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.31■□□□□ 0.2
CCNA1P78396 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.31■□□□□ 0.2
CCNA1P78396 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA1P78396 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA1P78396 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA1P78396 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CCNA1P78396 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA1P78396 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA1P78396 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CCNA1P78396 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CCNA1P78396 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.31■□□□□ 0.2
CCNA1P78396 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC16.31■□□□□ 0.2
CCNA1P78396 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC16.31■□□□□ 0.2
CCNA1P78396 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA1P78396 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC16.31■□□□□ 0.2
CCNA1P78396 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CCNA1P78396 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC16.31■□□□□ 0.2
CCNA1P78396 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC16.31■□□□□ 0.2
CCNA1P78396 AC095040.1-201ENST00000513286 675 ntBASIC16.31■□□□□ 0.2
CCNA1P78396 AC005740.1-201ENST00000515639 522 ntBASIC16.31■□□□□ 0.2
CCNA1P78396 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC16.31■□□□□ 0.2
CCNA1P78396 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA1P78396 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCNA1P78396 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC16.31■□□□□ 0.2
CCNA1P78396 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCNA1P78396 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA1P78396 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC16.31■□□□□ 0.2
CCNA1P78396 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA1P78396 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA1P78396 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA1P78396 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA1P78396 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CCNA1P78396 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA1P78396 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CCNA1P78396 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA1P78396 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.31■□□□□ 0.2
CCNA1P78396 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA1P78396 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCNA1P78396 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CCNA1P78396 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.31■□□□□ 0.2
CCNA1P78396 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.3■□□□□ 0.2
CCNA1P78396 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA1P78396 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA1P78396 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.3■□□□□ 0.2
CCNA1P78396 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA1P78396 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA1P78396 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA1P78396 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA1P78396 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC16.3■□□□□ 0.2
CCNA1P78396 AL135901.1-201ENST00000451812 333 ntBASIC16.3■□□□□ 0.2
CCNA1P78396 AGPAT5P1-201ENST00000455855 1019 ntBASIC16.3■□□□□ 0.2
CCNA1P78396 RN7SL788P-201ENST00000460504 316 ntBASIC16.3■□□□□ 0.2
CCNA1P78396 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA1P78396 AC008026.2-201ENST00000495438 348 ntBASIC16.3■□□□□ 0.2
CCNA1P78396 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA1P78396 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC16.3■□□□□ 0.2
CCNA1P78396 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.3■□□□□ 0.2
CCNA1P78396 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC16.3■□□□□ 0.2
CCNA1P78396 AC010976.2-201ENST00000609697 852 ntBASIC16.3■□□□□ 0.2
CCNA1P78396 AL118522.1-201ENST00000611368 560 ntBASIC16.3■□□□□ 0.2
CCNA1P78396 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCNA1P78396 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC16.3■□□□□ 0.2
CCNA1P78396 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms