Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 CICP20-201ENST00000443330 2801 ntBASIC12.98□□□□□ -0.33
ACTA1P68133 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ACTA1P68133 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.98□□□□□ -0.33
ACTA1P68133 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.97□□□□□ -0.33
ACTA1P68133 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
ACTA1P68133 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 CLUHP2-201ENST00000426660 1303 ntBASIC12.97□□□□□ -0.33
ACTA1P68133 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ACTA1P68133 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ACTA1P68133 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ACTA1P68133 MIR770-201ENST00000390219 98 ntBASIC12.97□□□□□ -0.33
ACTA1P68133 AL391647.1-201ENST00000395664 511 ntBASIC12.97□□□□□ -0.33
ACTA1P68133 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.97□□□□□ -0.33
ACTA1P68133 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.97□□□□□ -0.33
ACTA1P68133 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.97□□□□□ -0.33
ACTA1P68133 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.97□□□□□ -0.33
ACTA1P68133 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.97□□□□□ -0.33
ACTA1P68133 FTLP10-202ENST00000505798 471 ntBASIC12.97□□□□□ -0.33
ACTA1P68133 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
ACTA1P68133 RNA5SP421-201ENST00000516864 134 ntBASIC12.97□□□□□ -0.33
ACTA1P68133 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.97□□□□□ -0.33
ACTA1P68133 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.97□□□□□ -0.33
ACTA1P68133 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.97□□□□□ -0.33
ACTA1P68133 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.97□□□□□ -0.33
ACTA1P68133 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.97□□□□□ -0.33
ACTA1P68133 MIR8072-201ENST00000614241 80 ntBASIC12.97□□□□□ -0.33
ACTA1P68133 BAP1-211ENST00000615113 489 ntBASIC12.97□□□□□ -0.33
ACTA1P68133 AC138466.3-201ENST00000619983 221 ntBASIC12.97□□□□□ -0.33
ACTA1P68133 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
ACTA1P68133 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.97□□□□□ -0.33
ACTA1P68133 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.97□□□□□ -0.33
ACTA1P68133 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ACTA1P68133 AC114271.1-201ENST00000612689 2813 ntBASIC12.97□□□□□ -0.33
ACTA1P68133 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.97□□□□□ -0.33
ACTA1P68133 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
ACTA1P68133 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ACTA1P68133 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ACTA1P68133 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ACTA1P68133 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ACTA1P68133 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ACTA1P68133 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
ACTA1P68133 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ACTA1P68133 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.96□□□□□ -0.33
ACTA1P68133 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.96□□□□□ -0.33
ACTA1P68133 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.96□□□□□ -0.33
ACTA1P68133 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ACTA1P68133 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
ACTA1P68133 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.96□□□□□ -0.33
ACTA1P68133 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ACTA1P68133 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
ACTA1P68133 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ACTA1P68133 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ACTA1P68133 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ACTA1P68133 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.96□□□□□ -0.33
ACTA1P68133 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.96□□□□□ -0.33
ACTA1P68133 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
ACTA1P68133 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.96□□□□□ -0.33
ACTA1P68133 AC009474.1-201ENST00000455096 1565 ntBASIC12.96□□□□□ -0.33
ACTA1P68133 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ACTA1P68133 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ACTA1P68133 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.96□□□□□ -0.33
ACTA1P68133 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ACTA1P68133 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
ACTA1P68133 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.96□□□□□ -0.33
ACTA1P68133 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms