Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 MIR769-201ENST00000390225 118 ntBASIC10.8□□□□□ -0.68
CMC4P56277 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC10.8□□□□□ -0.68
CMC4P56277 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC10.8□□□□□ -0.68
CMC4P56277 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC10.8□□□□□ -0.68
CMC4P56277 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC10.8□□□□□ -0.68
CMC4P56277 AC104073.2-201ENST00000453737 312 ntBASIC10.8□□□□□ -0.68
CMC4P56277 SCARNA21-201ENST00000517026 139 ntBASIC10.8□□□□□ -0.68
CMC4P56277 AC022217.1-201ENST00000521069 738 ntBASIC10.8□□□□□ -0.68
CMC4P56277 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC10.8□□□□□ -0.68
CMC4P56277 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC10.8□□□□□ -0.68
CMC4P56277 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC10.8□□□□□ -0.68
CMC4P56277 CSH2-206ENST00000560142 749 ntTSL 5 BASIC10.8□□□□□ -0.68
CMC4P56277 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC10.8□□□□□ -0.68
CMC4P56277 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC10.8□□□□□ -0.68
CMC4P56277 AL805961.1-203ENST00000641078 1258 ntBASIC10.8□□□□□ -0.68
CMC4P56277 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
CMC4P56277 HPD-204ENST00000543163 1709 ntTSL 5 BASIC10.8□□□□□ -0.68
CMC4P56277 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 MYB-242ENST00000618728 3545 ntTSL 5 BASIC10.8□□□□□ -0.68
CMC4P56277 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC10.8□□□□□ -0.68
CMC4P56277 AL590824.1-201ENST00000403828 1349 ntBASIC10.8□□□□□ -0.68
CMC4P56277 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
CMC4P56277 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC10.8□□□□□ -0.68
CMC4P56277 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC10.79□□□□□ -0.68
CMC4P56277 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC10.79□□□□□ -0.68
CMC4P56277 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
CMC4P56277 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC10.79□□□□□ -0.68
CMC4P56277 TCAM1P-207ENST00000485295 1537 ntBASIC10.79□□□□□ -0.68
CMC4P56277 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
CMC4P56277 FAM90A7P-201ENST00000382628 1395 ntBASIC10.79□□□□□ -0.68
CMC4P56277 FAM90A23P-201ENST00000400136 1395 ntBASIC10.79□□□□□ -0.68
CMC4P56277 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC10.79□□□□□ -0.68
CMC4P56277 DBET-201ENST00000630918 3363 ntBASIC10.79□□□□□ -0.68
CMC4P56277 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC10.79□□□□□ -0.68
CMC4P56277 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
CMC4P56277 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
CMC4P56277 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
CMC4P56277 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
CMC4P56277 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC10.79□□□□□ -0.68
CMC4P56277 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC10.79□□□□□ -0.68
CMC4P56277 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
CMC4P56277 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
CMC4P56277 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CMC4P56277 NPPA-201ENST00000376476 728 ntTSL 3 BASIC10.79□□□□□ -0.68
CMC4P56277 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
CMC4P56277 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC10.79□□□□□ -0.68
CMC4P56277 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 VDAC1P1-201ENST00000439229 848 ntBASIC10.79□□□□□ -0.68
CMC4P56277 KLF2P1-201ENST00000447438 1042 ntBASIC10.79□□□□□ -0.68
CMC4P56277 AKR7A2P1-201ENST00000460134 915 ntBASIC10.79□□□□□ -0.68
CMC4P56277 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC10.79□□□□□ -0.68
CMC4P56277 AC125604.1-201ENST00000496255 707 ntBASIC10.79□□□□□ -0.68
CMC4P56277 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC10.79□□□□□ -0.68
CMC4P56277 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC10.79□□□□□ -0.68
CMC4P56277 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 AC003686.1-201ENST00000550956 1034 ntBASIC10.79□□□□□ -0.68
CMC4P56277 AC009779.1-201ENST00000551138 283 ntBASIC10.79□□□□□ -0.68
CMC4P56277 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC10.79□□□□□ -0.68
CMC4P56277 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC10.79□□□□□ -0.68
CMC4P56277 AL451050.2-201ENST00000606967 682 ntBASIC10.79□□□□□ -0.68
CMC4P56277 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC10.79□□□□□ -0.68
CMC4P56277 PCBP2-OT1-201ENST00000634357 590 ntBASIC10.79□□□□□ -0.68
CMC4P56277 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 MBLAC2-202ENST00000514906 1936 ntBASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms