Protein–RNA interactions for Protein: P55769

SNU13, NHP2-like protein 1, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13P55769 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNU13P55769 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SNU13P55769 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SNU13P55769 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNU13P55769 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNU13P55769 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNU13P55769 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.6□□□□□ -0.39
SNU13P55769 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNU13P55769 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SNU13P55769 AC134312.5-201ENST00000568031 1313 ntBASIC12.6□□□□□ -0.39
SNU13P55769 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.6□□□□□ -0.39
SNU13P55769 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SNU13P55769 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.6□□□□□ -0.39
SNU13P55769 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SNU13P55769 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SNU13P55769 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNU13P55769 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNU13P55769 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.59□□□□□ -0.39
SNU13P55769 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SNU13P55769 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNU13P55769 AC105206.1-202ENST00000314927 2368 ntBASIC12.59□□□□□ -0.39
SNU13P55769 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNU13P55769 RN7SL832P-201ENST00000607781 1756 ntBASIC12.59□□□□□ -0.39
SNU13P55769 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNU13P55769 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNU13P55769 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNU13P55769 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.59□□□□□ -0.39
SNU13P55769 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.59□□□□□ -0.39
SNU13P55769 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SNU13P55769 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.59□□□□□ -0.39
SNU13P55769 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
SNU13P55769 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SNU13P55769 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SNU13P55769 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.59□□□□□ -0.39
SNU13P55769 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.59□□□□□ -0.39
SNU13P55769 AC009486.1-201ENST00000569860 813 ntBASIC12.59□□□□□ -0.39
SNU13P55769 AC138761.1-201ENST00000584393 385 ntBASIC12.59□□□□□ -0.39
SNU13P55769 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SNU13P55769 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.59□□□□□ -0.39
SNU13P55769 AC145423.3-201ENST00000615987 467 ntBASIC12.59□□□□□ -0.39
SNU13P55769 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.59□□□□□ -0.39
SNU13P55769 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNU13P55769 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNU13P55769 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNU13P55769 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNU13P55769 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNU13P55769 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SNU13P55769 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SNU13P55769 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNU13P55769 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNU13P55769 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SNU13P55769 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNU13P55769 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNU13P55769 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNU13P55769 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
SNU13P55769 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
SNU13P55769 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
SNU13P55769 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SNU13P55769 TCAF1P1-201ENST00000414990 2232 ntBASIC12.58□□□□□ -0.39
SNU13P55769 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SNU13P55769 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
SNU13P55769 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.58□□□□□ -0.4
SNU13P55769 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SNU13P55769 CICP16-201ENST00000502609 2813 ntBASIC12.58□□□□□ -0.4
SNU13P55769 AC011840.2-201ENST00000563063 1520 ntBASIC12.58□□□□□ -0.4
SNU13P55769 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
SNU13P55769 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SNU13P55769 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SNU13P55769 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SNU13P55769 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SNU13P55769 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SNU13P55769 C8orf49-201ENST00000525043 1968 ntBASIC12.58□□□□□ -0.4
SNU13P55769 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SNU13P55769 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.58□□□□□ -0.4
SNU13P55769 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
SNU13P55769 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SNU13P55769 AL805961.2-201ENST00000642139 4817 ntBASIC12.58□□□□□ -0.4
SNU13P55769 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SNU13P55769 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SNU13P55769 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SNU13P55769 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SNU13P55769 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.58□□□□□ -0.4
SNU13P55769 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.58□□□□□ -0.4
SNU13P55769 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SNU13P55769 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SNU13P55769 AC022137.2-201ENST00000503482 481 ntBASIC12.58□□□□□ -0.4
SNU13P55769 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SNU13P55769 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.58□□□□□ -0.4
SNU13P55769 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.58□□□□□ -0.4
SNU13P55769 TP53TG3HP-202ENST00000569755 579 ntBASIC12.58□□□□□ -0.4
SNU13P55769 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.58□□□□□ -0.4
SNU13P55769 AC010319.3-201ENST00000597028 470 ntBASIC12.58□□□□□ -0.4
SNU13P55769 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.58□□□□□ -0.4
SNU13P55769 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.58□□□□□ -0.4
SNU13P55769 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
SNU13P55769 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SNU13P55769 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SNU13P55769 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SNU13P55769 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SNU13P55769 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms