Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.67□□□□□ -0.38
FOXG1P55316 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
FOXG1P55316 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.67□□□□□ -0.38
FOXG1P55316 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.67□□□□□ -0.38
FOXG1P55316 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.67□□□□□ -0.38
FOXG1P55316 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
FOXG1P55316 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.67□□□□□ -0.38
FOXG1P55316 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.67□□□□□ -0.38
FOXG1P55316 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
FOXG1P55316 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
FOXG1P55316 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
FOXG1P55316 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXG1P55316 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.66□□□□□ -0.38
FOXG1P55316 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FOXG1P55316 AC020910.6-201ENST00000623084 1459 ntBASIC12.66□□□□□ -0.38
FOXG1P55316 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXG1P55316 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXG1P55316 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXG1P55316 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXG1P55316 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXG1P55316 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXG1P55316 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXG1P55316 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXG1P55316 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXG1P55316 RNA5SP359-201ENST00000364838 113 ntBASIC12.66□□□□□ -0.38
FOXG1P55316 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.66□□□□□ -0.38
FOXG1P55316 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC12.66□□□□□ -0.38
FOXG1P55316 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC12.66□□□□□ -0.38
FOXG1P55316 AC090857.1-201ENST00000527400 390 ntBASIC12.66□□□□□ -0.38
FOXG1P55316 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.66□□□□□ -0.38
FOXG1P55316 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.66□□□□□ -0.38
FOXG1P55316 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FOXG1P55316 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.66□□□□□ -0.38
FOXG1P55316 CHMP4BP1-201ENST00000556017 588 ntBASIC12.66□□□□□ -0.38
FOXG1P55316 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
FOXG1P55316 AC090386.2-201ENST00000623010 1039 ntBASIC12.66□□□□□ -0.38
FOXG1P55316 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.66□□□□□ -0.38
FOXG1P55316 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.66□□□□□ -0.38
FOXG1P55316 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
FOXG1P55316 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FOXG1P55316 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FOXG1P55316 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.66□□□□□ -0.38
FOXG1P55316 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.66□□□□□ -0.38
FOXG1P55316 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
FOXG1P55316 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.66□□□□□ -0.38
FOXG1P55316 AC005089.1-201ENST00000619486 2241 ntBASIC12.66□□□□□ -0.38
FOXG1P55316 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
FOXG1P55316 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXG1P55316 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.66□□□□□ -0.38
FOXG1P55316 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.66□□□□□ -0.38
FOXG1P55316 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
FOXG1P55316 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
FOXG1P55316 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
FOXG1P55316 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
FOXG1P55316 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FOXG1P55316 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXG1P55316 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FOXG1P55316 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.66□□□□□ -0.38
FOXG1P55316 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
FOXG1P55316 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXG1P55316 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXG1P55316 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXG1P55316 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
FOXG1P55316 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXG1P55316 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXG1P55316 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FOXG1P55316 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXG1P55316 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FOXG1P55316 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXG1P55316 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
FOXG1P55316 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.65□□□□□ -0.38
FOXG1P55316 OR2I1P-210ENST00000642037 4691 ntBASIC12.65□□□□□ -0.38
FOXG1P55316 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXG1P55316 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FOXG1P55316 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
FOXG1P55316 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXG1P55316 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXG1P55316 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
FOXG1P55316 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXG1P55316 AC239868.1-201ENST00000369385 493 ntBASIC12.65□□□□□ -0.38
FOXG1P55316 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FOXG1P55316 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.65□□□□□ -0.38
FOXG1P55316 SLC25A24P2-201ENST00000415059 510 ntBASIC12.65□□□□□ -0.38
FOXG1P55316 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.65□□□□□ -0.38
FOXG1P55316 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.65□□□□□ -0.38
FOXG1P55316 PDIA3P2-201ENST00000428073 158 ntBASIC12.65□□□□□ -0.38
FOXG1P55316 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.65□□□□□ -0.38
FOXG1P55316 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.65□□□□□ -0.38
FOXG1P55316 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.65□□□□□ -0.38
FOXG1P55316 Z97180.1-201ENST00000445173 988 ntBASIC12.65□□□□□ -0.38
FOXG1P55316 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.65□□□□□ -0.38
FOXG1P55316 RN7SL277P-201ENST00000481521 288 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms