Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC18.39■□□□□ 0.53
BRPF1P55201 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRPF1P55201 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BRPF1P55201 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BRPF1P55201 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRPF1P55201 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRPF1P55201 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC18.38■□□□□ 0.53
BRPF1P55201 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRPF1P55201 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC18.38■□□□□ 0.53
BRPF1P55201 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BRPF1P55201 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRPF1P55201 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BRPF1P55201 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRPF1P55201 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRPF1P55201 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRPF1P55201 ABR-228ENST00000574437 3196 ntTSL 5 BASIC18.38■□□□□ 0.53
BRPF1P55201 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRPF1P55201 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC18.38■□□□□ 0.53
BRPF1P55201 AC103592.1-201ENST00000394513 664 ntBASIC18.38■□□□□ 0.53
BRPF1P55201 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
BRPF1P55201 AC016700.1-201ENST00000429424 312 ntBASIC18.38■□□□□ 0.53
BRPF1P55201 AC104784.1-201ENST00000473096 294 ntBASIC18.38■□□□□ 0.53
BRPF1P55201 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
BRPF1P55201 AC044849.1-201ENST00000519737 1188 ntBASIC18.38■□□□□ 0.53
BRPF1P55201 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC18.38■□□□□ 0.53
BRPF1P55201 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
BRPF1P55201 AL512310.5-201ENST00000551999 515 ntBASIC18.38■□□□□ 0.53
BRPF1P55201 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC18.38■□□□□ 0.53
BRPF1P55201 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
BRPF1P55201 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
BRPF1P55201 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRPF1P55201 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRPF1P55201 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BRPF1P55201 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRPF1P55201 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRPF1P55201 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRPF1P55201 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRPF1P55201 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRPF1P55201 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
BRPF1P55201 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC18.37■□□□□ 0.53
BRPF1P55201 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRPF1P55201 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRPF1P55201 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
BRPF1P55201 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRPF1P55201 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
BRPF1P55201 BEND3P1-201ENST00000421591 1944 ntBASIC18.37■□□□□ 0.53
BRPF1P55201 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRPF1P55201 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRPF1P55201 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRPF1P55201 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRPF1P55201 USP39-220ENST00000613444 2161 ntTSL 2 BASIC18.37■□□□□ 0.53
BRPF1P55201 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRPF1P55201 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
BRPF1P55201 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRPF1P55201 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
BRPF1P55201 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRPF1P55201 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC18.37■□□□□ 0.53
BRPF1P55201 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC18.37■□□□□ 0.53
BRPF1P55201 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRPF1P55201 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRPF1P55201 SUPT4H1P2-201ENST00000501248 353 ntBASIC18.37■□□□□ 0.53
BRPF1P55201 AC106794.1-201ENST00000506935 792 ntBASIC18.37■□□□□ 0.53
BRPF1P55201 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC18.37■□□□□ 0.53
BRPF1P55201 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC18.37■□□□□ 0.53
BRPF1P55201 PRKXP1-201ENST00000561423 1122 ntBASIC18.37■□□□□ 0.53
BRPF1P55201 FGFR3P5-201ENST00000564496 886 ntBASIC18.37■□□□□ 0.53
BRPF1P55201 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC18.37■□□□□ 0.53
BRPF1P55201 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC18.37■□□□□ 0.53
BRPF1P55201 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRPF1P55201 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRPF1P55201 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC18.37■□□□□ 0.53
BRPF1P55201 AL157813.1-201ENST00000612996 587 ntBASIC18.37■□□□□ 0.53
BRPF1P55201 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRPF1P55201 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRPF1P55201 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
BRPF1P55201 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
BRPF1P55201 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
BRPF1P55201 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRPF1P55201 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRPF1P55201 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
BRPF1P55201 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC18.37■□□□□ 0.53
BRPF1P55201 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRPF1P55201 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRPF1P55201 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
BRPF1P55201 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC18.37■□□□□ 0.53
BRPF1P55201 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRPF1P55201 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC18.37■□□□□ 0.53
BRPF1P55201 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRPF1P55201 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRPF1P55201 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRPF1P55201 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRPF1P55201 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRPF1P55201 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC18.36■□□□□ 0.53
BRPF1P55201 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
BRPF1P55201 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRPF1P55201 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
BRPF1P55201 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRPF1P55201 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRPF1P55201 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRPF1P55201 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms