Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC15.93■□□□□ 0.14
PMS1P54277 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PMS1P54277 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PMS1P54277 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
PMS1P54277 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.93■□□□□ 0.14
PMS1P54277 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PMS1P54277 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.93■□□□□ 0.14
PMS1P54277 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PMS1P54277 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PMS1P54277 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PMS1P54277 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PMS1P54277 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PMS1P54277 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PMS1P54277 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PMS1P54277 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PMS1P54277 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PMS1P54277 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PMS1P54277 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PMS1P54277 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PMS1P54277 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PMS1P54277 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC15.93■□□□□ 0.14
PMS1P54277 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.93■□□□□ 0.14
PMS1P54277 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PMS1P54277 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PMS1P54277 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC15.92■□□□□ 0.14
PMS1P54277 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.92■□□□□ 0.14
PMS1P54277 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PMS1P54277 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PMS1P54277 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC15.92■□□□□ 0.14
PMS1P54277 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PMS1P54277 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PMS1P54277 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PMS1P54277 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PMS1P54277 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.92■□□□□ 0.14
PMS1P54277 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PMS1P54277 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PMS1P54277 MIR1909-201ENST00000411312 80 ntBASIC15.92■□□□□ 0.14
PMS1P54277 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PMS1P54277 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.92■□□□□ 0.14
PMS1P54277 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PMS1P54277 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.92■□□□□ 0.14
PMS1P54277 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.92■□□□□ 0.14
PMS1P54277 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.92■□□□□ 0.14
PMS1P54277 AL162274.1-201ENST00000617191 1098 ntBASIC15.92■□□□□ 0.14
PMS1P54277 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PMS1P54277 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.92■□□□□ 0.14
PMS1P54277 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PMS1P54277 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PMS1P54277 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PMS1P54277 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.92■□□□□ 0.14
PMS1P54277 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PMS1P54277 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PMS1P54277 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.92■□□□□ 0.14
PMS1P54277 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PMS1P54277 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PMS1P54277 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
PMS1P54277 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PMS1P54277 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PMS1P54277 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PMS1P54277 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PMS1P54277 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PMS1P54277 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PMS1P54277 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PMS1P54277 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.91■□□□□ 0.14
PMS1P54277 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PMS1P54277 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.91■□□□□ 0.14
PMS1P54277 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC15.91■□□□□ 0.14
PMS1P54277 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PMS1P54277 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PMS1P54277 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PMS1P54277 USP17L6P-201ENST00000382470 1197 ntBASIC15.91■□□□□ 0.14
PMS1P54277 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.91■□□□□ 0.14
PMS1P54277 GAPDHP21-201ENST00000450301 1010 ntBASIC15.91■□□□□ 0.14
PMS1P54277 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PMS1P54277 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PMS1P54277 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.91■□□□□ 0.14
PMS1P54277 MIR6775-201ENST00000617557 69 ntBASIC15.91■□□□□ 0.14
PMS1P54277 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.91■□□□□ 0.14
PMS1P54277 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.91■□□□□ 0.14
PMS1P54277 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.91■□□□□ 0.14
PMS1P54277 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PMS1P54277 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PMS1P54277 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PMS1P54277 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PMS1P54277 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PMS1P54277 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PMS1P54277 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PMS1P54277 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.91■□□□□ 0.14
PMS1P54277 CYP4F23P-201ENST00000593402 1579 ntBASIC15.91■□□□□ 0.14
PMS1P54277 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PMS1P54277 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.91■□□□□ 0.14
PMS1P54277 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PMS1P54277 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PMS1P54277 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PMS1P54277 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.91■□□□□ 0.14
PMS1P54277 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PMS1P54277 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PMS1P54277 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PMS1P54277 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PMS1P54277 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms