Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 RN7SKP175-201ENST00000408472 289 ntBASIC14.65□□□□□ -0.06
LIMK2P53671 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LIMK2P53671 RPSAP36-202ENST00000494591 1261 ntBASIC14.65□□□□□ -0.06
LIMK2P53671 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.65□□□□□ -0.06
LIMK2P53671 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.65□□□□□ -0.06
LIMK2P53671 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
LIMK2P53671 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.65□□□□□ -0.06
LIMK2P53671 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.65□□□□□ -0.06
LIMK2P53671 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.65□□□□□ -0.06
LIMK2P53671 AL008638.5-201ENST00000623814 1298 ntBASIC14.65□□□□□ -0.06
LIMK2P53671 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.65□□□□□ -0.06
LIMK2P53671 AL139099.5-201ENST00000635274 300 ntBASIC14.65□□□□□ -0.06
LIMK2P53671 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LIMK2P53671 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.65□□□□□ -0.06
LIMK2P53671 AC009093.2-202ENST00000620513 2079 ntBASIC14.65□□□□□ -0.06
LIMK2P53671 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.65□□□□□ -0.06
LIMK2P53671 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LIMK2P53671 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
LIMK2P53671 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 TUBB8P4-201ENST00000511806 1324 ntBASIC14.65□□□□□ -0.06
LIMK2P53671 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.65□□□□□ -0.06
LIMK2P53671 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
LIMK2P53671 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
LIMK2P53671 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
LIMK2P53671 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
LIMK2P53671 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK2P53671 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.64□□□□□ -0.07
LIMK2P53671 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK2P53671 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK2P53671 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK2P53671 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.64□□□□□ -0.07
LIMK2P53671 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LIMK2P53671 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.64□□□□□ -0.07
LIMK2P53671 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK2P53671 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
LIMK2P53671 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK2P53671 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.64□□□□□ -0.07
LIMK2P53671 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
LIMK2P53671 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK2P53671 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
LIMK2P53671 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
LIMK2P53671 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LIMK2P53671 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK2P53671 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.64□□□□□ -0.07
LIMK2P53671 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK2P53671 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.64□□□□□ -0.07
LIMK2P53671 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK2P53671 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK2P53671 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK2P53671 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
LIMK2P53671 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK2P53671 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
LIMK2P53671 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK2P53671 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.64□□□□□ -0.07
LIMK2P53671 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK2P53671 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.64□□□□□ -0.07
LIMK2P53671 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.64□□□□□ -0.07
LIMK2P53671 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
LIMK2P53671 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.64□□□□□ -0.07
LIMK2P53671 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.64□□□□□ -0.07
LIMK2P53671 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.64□□□□□ -0.07
LIMK2P53671 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.64□□□□□ -0.07
LIMK2P53671 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LIMK2P53671 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.64□□□□□ -0.07
LIMK2P53671 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.64□□□□□ -0.07
LIMK2P53671 AC005695.3-201ENST00000614522 232 ntBASIC14.64□□□□□ -0.07
LIMK2P53671 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.64□□□□□ -0.07
LIMK2P53671 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK2P53671 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK2P53671 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LIMK2P53671 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.64□□□□□ -0.07
LIMK2P53671 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK2P53671 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
LIMK2P53671 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.64□□□□□ -0.07
LIMK2P53671 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.64□□□□□ -0.07
LIMK2P53671 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK2P53671 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK2P53671 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
LIMK2P53671 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK2P53671 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK2P53671 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.64□□□□□ -0.07
LIMK2P53671 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK2P53671 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LIMK2P53671 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK2P53671 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.64□□□□□ -0.07
LIMK2P53671 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK2P53671 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LIMK2P53671 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LIMK2P53671 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms