Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17.51■□□□□ 0.39
NUP98P52948 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.51■□□□□ 0.39
NUP98P52948 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.51■□□□□ 0.39
NUP98P52948 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUP98P52948 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUP98P52948 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUP98P52948 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NUP98P52948 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUP98P52948 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NUP98P52948 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
NUP98P52948 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUP98P52948 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.51■□□□□ 0.39
NUP98P52948 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC17.51■□□□□ 0.39
NUP98P52948 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.51■□□□□ 0.39
NUP98P52948 ZNF436-AS1-201ENST00000335648 2547 ntBASIC17.51■□□□□ 0.39
NUP98P52948 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NUP98P52948 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUP98P52948 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC17.51■□□□□ 0.39
NUP98P52948 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NUP98P52948 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NUP98P52948 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC17.51■□□□□ 0.39
NUP98P52948 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC17.51■□□□□ 0.39
NUP98P52948 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC17.51■□□□□ 0.39
NUP98P52948 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NUP98P52948 GALP-202ENST00000440823 889 ntTSL 5 BASIC17.51■□□□□ 0.39
NUP98P52948 GOLGA6L16P-201ENST00000441780 1299 ntBASIC17.51■□□□□ 0.39
NUP98P52948 AL451000.1-201ENST00000451300 1186 ntBASIC17.51■□□□□ 0.39
NUP98P52948 RN7SL147P-201ENST00000487345 298 ntBASIC17.51■□□□□ 0.39
NUP98P52948 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC17.51■□□□□ 0.39
NUP98P52948 RBM4-207ENST00000506523 654 ntTSL 3 BASIC17.51■□□□□ 0.39
NUP98P52948 AC068831.5-201ENST00000557387 328 ntBASIC17.51■□□□□ 0.39
NUP98P52948 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC17.51■□□□□ 0.39
NUP98P52948 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUP98P52948 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUP98P52948 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP98P52948 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP98P52948 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NUP98P52948 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NUP98P52948 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP98P52948 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NUP98P52948 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NUP98P52948 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC17.5■□□□□ 0.39
NUP98P52948 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP98P52948 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NUP98P52948 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NUP98P52948 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NUP98P52948 RNA5SP491-201ENST00000362936 118 ntBASIC17.5■□□□□ 0.39
NUP98P52948 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP98P52948 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC17.5■□□□□ 0.39
NUP98P52948 NALT1-202ENST00000450304 437 ntTSL 3 BASIC17.5■□□□□ 0.39
NUP98P52948 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC17.5■□□□□ 0.39
NUP98P52948 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC17.5■□□□□ 0.39
NUP98P52948 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC17.5■□□□□ 0.39
NUP98P52948 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC17.5■□□□□ 0.39
NUP98P52948 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC17.5■□□□□ 0.39
NUP98P52948 APOC1-209ENST00000592885 562 ntTSL 3 BASIC17.5■□□□□ 0.39
NUP98P52948 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP98P52948 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC17.5■□□□□ 0.39
NUP98P52948 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP98P52948 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NUP98P52948 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP98P52948 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP98P52948 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP98P52948 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
NUP98P52948 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP98P52948 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP98P52948 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP98P52948 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
NUP98P52948 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP98P52948 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NUP98P52948 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.49■□□□□ 0.39
NUP98P52948 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP98P52948 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP98P52948 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
NUP98P52948 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NUP98P52948 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC17.49■□□□□ 0.39
NUP98P52948 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC17.49■□□□□ 0.39
NUP98P52948 AGPAT5P1-201ENST00000455855 1019 ntBASIC17.49■□□□□ 0.39
NUP98P52948 AC063952.3-201ENST00000467756 308 ntBASIC17.49■□□□□ 0.39
NUP98P52948 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NUP98P52948 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC17.49■□□□□ 0.39
NUP98P52948 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
NUP98P52948 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC17.49■□□□□ 0.39
NUP98P52948 ABHD17AP9-201ENST00000561925 548 ntBASIC17.49■□□□□ 0.39
NUP98P52948 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC17.49■□□□□ 0.39
NUP98P52948 TYMSP2-201ENST00000589501 424 ntBASIC17.49■□□□□ 0.39
NUP98P52948 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NUP98P52948 AL139339.2-201ENST00000608063 657 ntBASIC17.49■□□□□ 0.39
NUP98P52948 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
NUP98P52948 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP98P52948 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.49■□□□□ 0.39
NUP98P52948 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.49■□□□□ 0.39
NUP98P52948 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP98P52948 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NUP98P52948 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP98P52948 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
NUP98P52948 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP98P52948 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP98P52948 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
NUP98P52948 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms