Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC002472.3-201ENST00000640124 621 ntBASIC13.59□□□□□ -0.23
RNF144AP50876 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF144AP50876 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.59□□□□□ -0.23
RNF144AP50876 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF144AP50876 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RNF144AP50876 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF144AP50876 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.59□□□□□ -0.23
RNF144AP50876 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF144AP50876 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.59□□□□□ -0.23
RNF144AP50876 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RNF144AP50876 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF144AP50876 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF144AP50876 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RNF144AP50876 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RNF144AP50876 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF144AP50876 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF144AP50876 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF144AP50876 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
RNF144AP50876 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RNF144AP50876 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
RNF144AP50876 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF144AP50876 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.59□□□□□ -0.23
RNF144AP50876 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.59□□□□□ -0.23
RNF144AP50876 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF144AP50876 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.59□□□□□ -0.23
RNF144AP50876 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.58□□□□□ -0.23
RNF144AP50876 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.58□□□□□ -0.23
RNF144AP50876 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RNF144AP50876 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RNF144AP50876 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
RNF144AP50876 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
RNF144AP50876 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.58□□□□□ -0.23
RNF144AP50876 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
RNF144AP50876 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
RNF144AP50876 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF144AP50876 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF144AP50876 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF144AP50876 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.58□□□□□ -0.24
RNF144AP50876 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF144AP50876 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RNF144AP50876 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
RNF144AP50876 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.58□□□□□ -0.24
RNF144AP50876 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF144AP50876 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF144AP50876 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF144AP50876 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNF144AP50876 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
RNF144AP50876 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.58□□□□□ -0.24
RNF144AP50876 MIR1909-201ENST00000411312 80 ntBASIC13.58□□□□□ -0.24
RNF144AP50876 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
RNF144AP50876 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.58□□□□□ -0.24
RNF144AP50876 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNF144AP50876 KLF2P4-201ENST00000451959 1225 ntBASIC13.58□□□□□ -0.24
RNF144AP50876 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.58□□□□□ -0.24
RNF144AP50876 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.58□□□□□ -0.24
RNF144AP50876 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.58□□□□□ -0.24
RNF144AP50876 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.58□□□□□ -0.24
RNF144AP50876 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.58□□□□□ -0.24
RNF144AP50876 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.58□□□□□ -0.24
RNF144AP50876 PPY2P-201ENST00000582808 702 ntBASIC13.58□□□□□ -0.24
RNF144AP50876 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNF144AP50876 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.58□□□□□ -0.24
RNF144AP50876 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
RNF144AP50876 MIR6775-201ENST00000617557 69 ntBASIC13.58□□□□□ -0.24
RNF144AP50876 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF144AP50876 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNF144AP50876 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF144AP50876 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
RNF144AP50876 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
RNF144AP50876 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF144AP50876 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.58□□□□□ -0.24
RNF144AP50876 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RNF144AP50876 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF144AP50876 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.58□□□□□ -0.24
RNF144AP50876 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF144AP50876 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.58□□□□□ -0.24
RNF144AP50876 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.58□□□□□ -0.24
RNF144AP50876 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.58□□□□□ -0.24
RNF144AP50876 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
RNF144AP50876 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNF144AP50876 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNF144AP50876 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNF144AP50876 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.58□□□□□ -0.24
RNF144AP50876 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.58□□□□□ -0.24
RNF144AP50876 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF144AP50876 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF144AP50876 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF144AP50876 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF144AP50876 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF144AP50876 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF144AP50876 AC011474.4-201ENST00000623523 2076 ntBASIC13.57□□□□□ -0.24
RNF144AP50876 AP000593.2-201ENST00000542775 1433 ntBASIC13.57□□□□□ -0.24
RNF144AP50876 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF144AP50876 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF144AP50876 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF144AP50876 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF144AP50876 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.57□□□□□ -0.24
RNF144AP50876 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF144AP50876 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF144AP50876 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms