Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 KRT8P28-201ENST00000433288 1390 ntBASIC12.81□□□□□ -0.36
CX3CR1P49238 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CX3CR1P49238 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.8□□□□□ -0.36
CX3CR1P49238 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CR1P49238 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CR1P49238 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
CX3CR1P49238 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CR1P49238 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.8□□□□□ -0.36
CX3CR1P49238 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CX3CR1P49238 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CR1P49238 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CR1P49238 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CX3CR1P49238 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CX3CR1P49238 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CR1P49238 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CX3CR1P49238 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.8□□□□□ -0.36
CX3CR1P49238 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CR1P49238 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.8□□□□□ -0.36
CX3CR1P49238 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CR1P49238 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.8□□□□□ -0.36
CX3CR1P49238 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CR1P49238 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CR1P49238 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CR1P49238 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CR1P49238 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CR1P49238 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CR1P49238 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
CX3CR1P49238 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
CX3CR1P49238 AL512384.1-201ENST00000406683 331 ntBASIC12.8□□□□□ -0.36
CX3CR1P49238 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
CX3CR1P49238 TMEM14DP-201ENST00000422205 345 ntBASIC12.8□□□□□ -0.36
CX3CR1P49238 AC016694.1-201ENST00000434179 700 ntBASIC12.8□□□□□ -0.36
CX3CR1P49238 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.8□□□□□ -0.36
CX3CR1P49238 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
CX3CR1P49238 AP003171.2-201ENST00000528208 925 ntBASIC12.8□□□□□ -0.36
CX3CR1P49238 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CR1P49238 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.8□□□□□ -0.36
CX3CR1P49238 MIR4683-201ENST00000579659 81 ntBASIC12.8□□□□□ -0.36
CX3CR1P49238 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CX3CR1P49238 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.8□□□□□ -0.36
CX3CR1P49238 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CX3CR1P49238 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CX3CR1P49238 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CX3CR1P49238 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CX3CR1P49238 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CR1P49238 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CR1P49238 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CX3CR1P49238 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CR1P49238 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
CX3CR1P49238 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CR1P49238 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CR1P49238 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CX3CR1P49238 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CR1P49238 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
CX3CR1P49238 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CR1P49238 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.8□□□□□ -0.36
CX3CR1P49238 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CR1P49238 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.79□□□□□ -0.36
CX3CR1P49238 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CX3CR1P49238 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CX3CR1P49238 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CX3CR1P49238 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CX3CR1P49238 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
CX3CR1P49238 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.79□□□□□ -0.36
CX3CR1P49238 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.79□□□□□ -0.36
CX3CR1P49238 ARSEP1-201ENST00000420443 635 ntBASIC12.79□□□□□ -0.36
CX3CR1P49238 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
CX3CR1P49238 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CX3CR1P49238 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.79□□□□□ -0.36
CX3CR1P49238 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.79□□□□□ -0.36
CX3CR1P49238 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CX3CR1P49238 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.79□□□□□ -0.36
CX3CR1P49238 AC027237.1-201ENST00000560942 655 ntBASIC12.79□□□□□ -0.36
CX3CR1P49238 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.79□□□□□ -0.36
CX3CR1P49238 AC132938.2-201ENST00000579188 680 ntBASIC12.79□□□□□ -0.36
CX3CR1P49238 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CX3CR1P49238 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 AC244669.2-201ENST00000612320 853 ntBASIC12.79□□□□□ -0.36
CX3CR1P49238 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.79□□□□□ -0.36
CX3CR1P49238 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.79□□□□□ -0.36
CX3CR1P49238 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms