Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RFC3P40938 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RFC3P40938 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
RFC3P40938 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RFC3P40938 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RFC3P40938 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RFC3P40938 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RFC3P40938 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RFC3P40938 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RFC3P40938 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RFC3P40938 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RFC3P40938 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RFC3P40938 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.34□□□□□ -0.27
RFC3P40938 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RFC3P40938 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RFC3P40938 CYP4F23P-201ENST00000593402 1579 ntBASIC13.34□□□□□ -0.27
RFC3P40938 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
RFC3P40938 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.34□□□□□ -0.27
RFC3P40938 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RFC3P40938 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RFC3P40938 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RFC3P40938 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RFC3P40938 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.34□□□□□ -0.27
RFC3P40938 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.34□□□□□ -0.27
RFC3P40938 ISCA2P1-201ENST00000425548 448 ntBASIC13.34□□□□□ -0.27
RFC3P40938 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.34□□□□□ -0.27
RFC3P40938 AL035414.1-201ENST00000451327 857 ntBASIC13.34□□□□□ -0.27
RFC3P40938 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.34□□□□□ -0.27
RFC3P40938 RN7SL769P-201ENST00000469386 295 ntBASIC13.34□□□□□ -0.27
RFC3P40938 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.34□□□□□ -0.27
RFC3P40938 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.34□□□□□ -0.27
RFC3P40938 RBM8B-201ENST00000555532 525 ntBASIC13.34□□□□□ -0.27
RFC3P40938 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.34□□□□□ -0.27
RFC3P40938 AL133499.1-201ENST00000596207 608 ntBASIC13.34□□□□□ -0.27
RFC3P40938 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.34□□□□□ -0.27
RFC3P40938 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.34□□□□□ -0.27
RFC3P40938 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.34□□□□□ -0.27
RFC3P40938 AF254983.2-201ENST00000612331 135 ntBASIC13.34□□□□□ -0.27
RFC3P40938 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RFC3P40938 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RFC3P40938 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RFC3P40938 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
RFC3P40938 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RFC3P40938 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RFC3P40938 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RFC3P40938 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RFC3P40938 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RFC3P40938 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
RFC3P40938 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RFC3P40938 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
RFC3P40938 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.34□□□□□ -0.27
RFC3P40938 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RFC3P40938 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RFC3P40938 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RFC3P40938 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.34□□□□□ -0.27
RFC3P40938 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.34□□□□□ -0.27
RFC3P40938 TMBIM7P-202ENST00000641474 1516 ntBASIC13.34□□□□□ -0.27
RFC3P40938 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RFC3P40938 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.34□□□□□ -0.27
RFC3P40938 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RFC3P40938 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RFC3P40938 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RFC3P40938 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
RFC3P40938 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
RFC3P40938 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.33□□□□□ -0.28
RFC3P40938 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
RFC3P40938 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.33□□□□□ -0.28
RFC3P40938 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
RFC3P40938 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.33□□□□□ -0.28
RFC3P40938 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.33□□□□□ -0.28
RFC3P40938 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RFC3P40938 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RFC3P40938 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RFC3P40938 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RFC3P40938 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RFC3P40938 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RFC3P40938 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.33□□□□□ -0.28
RFC3P40938 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RFC3P40938 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.33□□□□□ -0.28
RFC3P40938 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.33□□□□□ -0.28
RFC3P40938 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
RFC3P40938 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.33□□□□□ -0.28
RFC3P40938 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.33□□□□□ -0.28
RFC3P40938 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.33□□□□□ -0.28
RFC3P40938 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RFC3P40938 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.33□□□□□ -0.28
RFC3P40938 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.33□□□□□ -0.28
RFC3P40938 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RFC3P40938 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RFC3P40938 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RFC3P40938 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RFC3P40938 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.33□□□□□ -0.28
RFC3P40938 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RFC3P40938 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RFC3P40938 PTENP1-202ENST00000532280 3996 ntBASIC13.33□□□□□ -0.28
RFC3P40938 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RFC3P40938 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.33□□□□□ -0.28
RFC3P40938 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.33□□□□□ -0.28
RFC3P40938 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.33□□□□□ -0.28
RFC3P40938 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms