Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GRIK1P39086 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.27■□□□□ 0.03
GRIK1P39086 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GRIK1P39086 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GRIK1P39086 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GRIK1P39086 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GRIK1P39086 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.27■□□□□ 0.03
GRIK1P39086 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
GRIK1P39086 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GRIK1P39086 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GRIK1P39086 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GRIK1P39086 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GRIK1P39086 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GRIK1P39086 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIK1P39086 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
GRIK1P39086 AC015909.3-201ENST00000572855 1794 ntBASIC15.26■□□□□ 0.03
GRIK1P39086 SBF1P1-201ENST00000444527 5631 ntBASIC15.26■□□□□ 0.03
GRIK1P39086 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GRIK1P39086 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GRIK1P39086 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIK1P39086 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.26■□□□□ 0.03
GRIK1P39086 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
GRIK1P39086 AC140479.7-201ENST00000636301 2332 ntBASIC15.26■□□□□ 0.03
GRIK1P39086 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIK1P39086 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
GRIK1P39086 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.26■□□□□ 0.03
GRIK1P39086 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.26■□□□□ 0.03
GRIK1P39086 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.26■□□□□ 0.03
GRIK1P39086 AL161932.2-201ENST00000435436 679 ntBASIC15.26■□□□□ 0.03
GRIK1P39086 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.26■□□□□ 0.03
GRIK1P39086 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.26■□□□□ 0.03
GRIK1P39086 AC134698.3-201ENST00000523880 214 ntBASIC15.26■□□□□ 0.03
GRIK1P39086 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.26■□□□□ 0.03
GRIK1P39086 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.26■□□□□ 0.03
GRIK1P39086 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.26■□□□□ 0.03
GRIK1P39086 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.26■□□□□ 0.03
GRIK1P39086 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC15.26■□□□□ 0.03
GRIK1P39086 AC012044.1-201ENST00000603431 297 ntBASIC15.26■□□□□ 0.03
GRIK1P39086 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.26■□□□□ 0.03
GRIK1P39086 AF254983.2-201ENST00000612331 135 ntBASIC15.26■□□□□ 0.03
GRIK1P39086 AL353770.1-201ENST00000614915 403 ntBASIC15.26■□□□□ 0.03
GRIK1P39086 MIR6769A-201ENST00000617340 73 ntBASIC15.26■□□□□ 0.03
GRIK1P39086 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIK1P39086 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIK1P39086 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.26■□□□□ 0.03
GRIK1P39086 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GRIK1P39086 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIK1P39086 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
GRIK1P39086 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.26■□□□□ 0.03
GRIK1P39086 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GRIK1P39086 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIK1P39086 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
GRIK1P39086 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIK1P39086 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIK1P39086 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIK1P39086 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GRIK1P39086 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIK1P39086 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
GRIK1P39086 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GRIK1P39086 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIK1P39086 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
GRIK1P39086 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
GRIK1P39086 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
GRIK1P39086 AL390755.1-201ENST00000623716 2027 ntBASIC15.26■□□□□ 0.03
GRIK1P39086 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
GRIK1P39086 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GRIK1P39086 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIK1P39086 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIK1P39086 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GRIK1P39086 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GRIK1P39086 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.25■□□□□ 0.03
GRIK1P39086 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.25■□□□□ 0.03
GRIK1P39086 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.25■□□□□ 0.03
GRIK1P39086 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.25■□□□□ 0.03
GRIK1P39086 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GRIK1P39086 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.25■□□□□ 0.03
GRIK1P39086 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
GRIK1P39086 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GRIK1P39086 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GRIK1P39086 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GRIK1P39086 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GRIK1P39086 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.25■□□□□ 0.03
GRIK1P39086 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.25■□□□□ 0.03
GRIK1P39086 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GRIK1P39086 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
GRIK1P39086 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GRIK1P39086 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.25■□□□□ 0.03
GRIK1P39086 ELK2AP-201ENST00000392510 1007 ntBASIC15.25■□□□□ 0.03
GRIK1P39086 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.25■□□□□ 0.03
GRIK1P39086 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.25■□□□□ 0.03
GRIK1P39086 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.25■□□□□ 0.03
GRIK1P39086 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.25■□□□□ 0.03
GRIK1P39086 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GRIK1P39086 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.25■□□□□ 0.03
GRIK1P39086 AC079336.7-201ENST00000623428 1078 ntBASIC15.25■□□□□ 0.03
GRIK1P39086 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GRIK1P39086 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GRIK1P39086 AC011498.7-201ENST00000624986 2027 ntBASIC15.25■□□□□ 0.03
GRIK1P39086 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GRIK1P39086 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms