Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIM23P36406 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM23P36406 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM23P36406 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRIM23P36406 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM23P36406 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRIM23P36406 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
TRIM23P36406 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM23P36406 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 AC114947.1-202ENST00000514136 344 ntBASIC14.22□□□□□ -0.13
TRIM23P36406 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRIM23P36406 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM23P36406 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
TRIM23P36406 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 KRT8P1-201ENST00000557533 1207 ntBASIC14.22□□□□□ -0.13
TRIM23P36406 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM23P36406 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.22□□□□□ -0.13
TRIM23P36406 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.22□□□□□ -0.13
TRIM23P36406 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRIM23P36406 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIM23P36406 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.22□□□□□ -0.13
TRIM23P36406 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIM23P36406 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIM23P36406 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRIM23P36406 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.22□□□□□ -0.13
TRIM23P36406 AC128714.1-201ENST00000637035 887 ntBASIC14.22□□□□□ -0.13
TRIM23P36406 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM23P36406 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM23P36406 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM23P36406 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TRIM23P36406 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM23P36406 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRIM23P36406 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM23P36406 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIM23P36406 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRIM23P36406 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM23P36406 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRIM23P36406 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.21□□□□□ -0.13
TRIM23P36406 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM23P36406 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM23P36406 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM23P36406 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TRIM23P36406 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM23P36406 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRIM23P36406 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM23P36406 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM23P36406 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM23P36406 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM23P36406 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.21□□□□□ -0.13
TRIM23P36406 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.21□□□□□ -0.13
TRIM23P36406 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.21□□□□□ -0.13
TRIM23P36406 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM23P36406 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.21□□□□□ -0.13
TRIM23P36406 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM23P36406 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM23P36406 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM23P36406 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TRIM23P36406 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRIM23P36406 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.21□□□□□ -0.13
TRIM23P36406 RPS9P1-201ENST00000419943 583 ntBASIC14.21□□□□□ -0.13
TRIM23P36406 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.21□□□□□ -0.13
TRIM23P36406 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.21□□□□□ -0.13
TRIM23P36406 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.21□□□□□ -0.13
TRIM23P36406 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.21□□□□□ -0.13
TRIM23P36406 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.21□□□□□ -0.13
TRIM23P36406 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.21□□□□□ -0.13
TRIM23P36406 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.21□□□□□ -0.13
TRIM23P36406 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.21□□□□□ -0.13
TRIM23P36406 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.21□□□□□ -0.13
TRIM23P36406 MIR3677-201ENST00000578964 60 ntBASIC14.21□□□□□ -0.13
TRIM23P36406 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM23P36406 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRIM23P36406 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.21□□□□□ -0.13
TRIM23P36406 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRIM23P36406 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM23P36406 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM23P36406 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM23P36406 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM23P36406 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.21□□□□□ -0.13
TRIM23P36406 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM23P36406 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM23P36406 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRIM23P36406 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.21□□□□□ -0.14
TRIM23P36406 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms