Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL136370.1-201ENST00000608166 691 ntBASIC14.4□□□□□ -0.1
VARSP26640 AC138466.3-201ENST00000619983 221 ntBASIC14.4□□□□□ -0.1
VARSP26640 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
VARSP26640 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VARSP26640 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
VARSP26640 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.4□□□□□ -0.1
VARSP26640 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VARSP26640 AL359881.3-201ENST00000602640 1721 ntBASIC14.4□□□□□ -0.1
VARSP26640 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VARSP26640 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VARSP26640 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
VARSP26640 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VARSP26640 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VARSP26640 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.4□□□□□ -0.1
VARSP26640 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.4□□□□□ -0.1
VARSP26640 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.4□□□□□ -0.1
VARSP26640 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.4□□□□□ -0.1
VARSP26640 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VARSP26640 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.4□□□□□ -0.1
VARSP26640 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VARSP26640 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VARSP26640 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
VARSP26640 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VARSP26640 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
VARSP26640 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
VARSP26640 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.39□□□□□ -0.11
VARSP26640 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.39□□□□□ -0.11
VARSP26640 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.39□□□□□ -0.11
VARSP26640 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.39□□□□□ -0.11
VARSP26640 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.39□□□□□ -0.11
VARSP26640 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.39□□□□□ -0.11
VARSP26640 TLE1P1-201ENST00000422965 589 ntBASIC14.39□□□□□ -0.11
VARSP26640 FAM197Y7-201ENST00000432892 766 ntBASIC14.39□□□□□ -0.11
VARSP26640 C2orf27AP3-201ENST00000434123 579 ntBASIC14.39□□□□□ -0.11
VARSP26640 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.39□□□□□ -0.11
VARSP26640 MESTP3-201ENST00000503460 968 ntBASIC14.39□□□□□ -0.11
VARSP26640 AL391280.1-201ENST00000506969 1062 ntBASIC14.39□□□□□ -0.11
VARSP26640 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.39□□□□□ -0.11
VARSP26640 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.39□□□□□ -0.11
VARSP26640 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.39□□□□□ -0.11
VARSP26640 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
VARSP26640 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.39□□□□□ -0.11
VARSP26640 AL133445.2-201ENST00000611191 527 ntBASIC14.39□□□□□ -0.11
VARSP26640 AL354718.3-201ENST00000616414 581 ntBASIC14.39□□□□□ -0.11
VARSP26640 GPR182-203ENST00000622922 591 ntBASIC14.39□□□□□ -0.11
VARSP26640 CR382287.1-201ENST00000623954 586 ntBASIC14.39□□□□□ -0.11
VARSP26640 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.39□□□□□ -0.11
VARSP26640 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.39□□□□□ -0.11
VARSP26640 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.39□□□□□ -0.11
VARSP26640 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
VARSP26640 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
VARSP26640 FKBP4P6-201ENST00000457486 1332 ntBASIC14.39□□□□□ -0.11
VARSP26640 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.39□□□□□ -0.11
VARSP26640 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.38□□□□□ -0.11
VARSP26640 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.38□□□□□ -0.11
VARSP26640 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
VARSP26640 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
VARSP26640 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
VARSP26640 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.38□□□□□ -0.11
VARSP26640 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms