Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CD40P25942 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CD40P25942 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD40P25942 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD40P25942 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD40P25942 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CD40P25942 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CD40P25942 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD40P25942 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD40P25942 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CD40P25942 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.47□□□□□ -0.41
CD40P25942 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.47□□□□□ -0.41
CD40P25942 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CD40P25942 AC064801.2-201ENST00000625052 1303 ntBASIC12.47□□□□□ -0.41
CD40P25942 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD40P25942 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD40P25942 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.47□□□□□ -0.41
CD40P25942 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.47□□□□□ -0.41
CD40P25942 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.47□□□□□ -0.41
CD40P25942 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.47□□□□□ -0.41
CD40P25942 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC12.47□□□□□ -0.41
CD40P25942 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD40P25942 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC12.47□□□□□ -0.41
CD40P25942 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC12.47□□□□□ -0.41
CD40P25942 RN7SL67P-201ENST00000492147 296 ntBASIC12.47□□□□□ -0.41
CD40P25942 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CD40P25942 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.47□□□□□ -0.41
CD40P25942 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC12.47□□□□□ -0.41
CD40P25942 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.47□□□□□ -0.41
CD40P25942 COG4-212ENST00000564653 590 ntTSL 5 BASIC12.47□□□□□ -0.41
CD40P25942 PHBP15-201ENST00000574228 665 ntBASIC12.47□□□□□ -0.41
CD40P25942 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.47□□□□□ -0.41
CD40P25942 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CD40P25942 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CD40P25942 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.47□□□□□ -0.41
CD40P25942 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC12.47□□□□□ -0.41
CD40P25942 AL022334.2-201ENST00000610000 484 ntBASIC12.47□□□□□ -0.41
CD40P25942 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC12.47□□□□□ -0.41
CD40P25942 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD40P25942 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CD40P25942 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.47□□□□□ -0.41
CD40P25942 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD40P25942 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD40P25942 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.47□□□□□ -0.41
CD40P25942 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD40P25942 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD40P25942 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD40P25942 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CD40P25942 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD40P25942 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.47□□□□□ -0.41
CD40P25942 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.47□□□□□ -0.41
CD40P25942 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD40P25942 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD40P25942 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD40P25942 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD40P25942 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
CD40P25942 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CD40P25942 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.46□□□□□ -0.41
CD40P25942 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CD40P25942 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.46□□□□□ -0.41
CD40P25942 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.46□□□□□ -0.41
CD40P25942 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
CD40P25942 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.46□□□□□ -0.41
CD40P25942 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CD40P25942 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CD40P25942 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
CD40P25942 KRT18P9-201ENST00000604826 1300 ntBASIC12.46□□□□□ -0.41
CD40P25942 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CD40P25942 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.46□□□□□ -0.41
CD40P25942 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD40P25942 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD40P25942 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD40P25942 OR2K2-202ENST00000374428 1038 ntBASIC12.46□□□□□ -0.41
CD40P25942 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CD40P25942 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.46□□□□□ -0.41
CD40P25942 BANF1P3-201ENST00000412556 261 ntBASIC12.46□□□□□ -0.41
CD40P25942 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC12.46□□□□□ -0.41
CD40P25942 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CD40P25942 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.46□□□□□ -0.41
CD40P25942 AC092580.1-201ENST00000433998 658 ntBASIC12.46□□□□□ -0.41
CD40P25942 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.46□□□□□ -0.41
CD40P25942 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.46□□□□□ -0.41
CD40P25942 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CD40P25942 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CD40P25942 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CD40P25942 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CD40P25942 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC12.46□□□□□ -0.41
CD40P25942 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC12.46□□□□□ -0.41
CD40P25942 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.46□□□□□ -0.41
CD40P25942 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC12.46□□□□□ -0.41
CD40P25942 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC12.46□□□□□ -0.41
CD40P25942 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD40P25942 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CD40P25942 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD40P25942 AC067750.1-201ENST00000608826 6545 ntBASIC12.46□□□□□ -0.41
CD40P25942 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
CD40P25942 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
CD40P25942 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CD40P25942 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CD40P25942 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms