Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 ASS1P1-201ENST00000402854 1237 ntBASIC23.81■■□□□ 1.4
CFTRP13569 FTH1P18-201ENST00000412071 549 ntBASIC23.81■■□□□ 1.4
CFTRP13569 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CFTRP13569 AC104212.2-201ENST00000478813 628 ntBASIC23.81■■□□□ 1.4
CFTRP13569 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC23.81■■□□□ 1.4
CFTRP13569 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC23.81■■□□□ 1.4
CFTRP13569 ACTBP9-201ENST00000587663 1099 ntBASIC23.81■■□□□ 1.4
CFTRP13569 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CFTRP13569 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CFTRP13569 AC008894.3-201ENST00000624324 3103 ntBASIC23.81■■□□□ 1.4
CFTRP13569 AC022532.1-201ENST00000624563 1728 ntBASIC23.81■■□□□ 1.4
CFTRP13569 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CFTRP13569 AL139424.3-202ENST00000641619 917 ntBASIC23.81■■□□□ 1.4
CFTRP13569 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CFTRP13569 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CFTRP13569 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC23.8■■□□□ 1.4
CFTRP13569 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CFTRP13569 NRADDP-202ENST00000641269 1585 ntBASIC23.8■■□□□ 1.4
CFTRP13569 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC23.8■■□□□ 1.4
CFTRP13569 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CFTRP13569 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC23.8■■□□□ 1.4
CFTRP13569 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC23.8■■□□□ 1.4
CFTRP13569 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CFTRP13569 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CFTRP13569 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC23.8■■□□□ 1.4
CFTRP13569 MECR-202ENST00000373791 2416 ntTSL 2 BASIC23.8■■□□□ 1.4
CFTRP13569 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC23.8■■□□□ 1.4
CFTRP13569 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC23.8■■□□□ 1.4
CFTRP13569 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CFTRP13569 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CFTRP13569 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC23.79■■□□□ 1.4
CFTRP13569 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CFTRP13569 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CFTRP13569 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CFTRP13569 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CFTRP13569 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CFTRP13569 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC23.79■■□□□ 1.4
CFTRP13569 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CFTRP13569 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CFTRP13569 MYB-242ENST00000618728 3545 ntTSL 5 BASIC23.79■■□□□ 1.4
CFTRP13569 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CFTRP13569 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CFTRP13569 RPL29P2-202ENST00000498671 657 ntBASIC23.79■■□□□ 1.4
CFTRP13569 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC23.79■■□□□ 1.4
CFTRP13569 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC23.79■■□□□ 1.4
CFTRP13569 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CFTRP13569 EMP3-204ENST00000596315 761 ntTSL 2 BASIC23.79■■□□□ 1.4
CFTRP13569 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC23.79■■□□□ 1.4
CFTRP13569 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CFTRP13569 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CFTRP13569 GSN-215ENST00000545652 2428 ntTSL 2 BASIC23.79■■□□□ 1.4
CFTRP13569 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CFTRP13569 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
CFTRP13569 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CFTRP13569 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
CFTRP13569 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CFTRP13569 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CFTRP13569 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CFTRP13569 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC23.78■■□□□ 1.4
CFTRP13569 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CFTRP13569 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC23.78■■□□□ 1.4
CFTRP13569 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
CFTRP13569 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
CFTRP13569 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
CFTRP13569 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CFTRP13569 KRT8P42-201ENST00000405771 1399 ntBASIC23.78■■□□□ 1.4
CFTRP13569 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CFTRP13569 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CFTRP13569 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CFTRP13569 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CFTRP13569 RPL18AP15-201ENST00000430258 517 ntBASIC23.78■■□□□ 1.4
CFTRP13569 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC23.78■■□□□ 1.4
CFTRP13569 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
CFTRP13569 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CFTRP13569 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CFTRP13569 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC23.78■■□□□ 1.4
CFTRP13569 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CFTRP13569 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC23.78■■□□□ 1.4
CFTRP13569 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CFTRP13569 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CFTRP13569 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
CFTRP13569 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CFTRP13569 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CFTRP13569 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CFTRP13569 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CFTRP13569 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CFTRP13569 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CFTRP13569 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CFTRP13569 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CFTRP13569 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC23.77■■□□□ 1.4
CFTRP13569 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CFTRP13569 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC23.77■■□□□ 1.4
CFTRP13569 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC23.77■■□□□ 1.4
CFTRP13569 AC007279.1-201ENST00000448547 837 ntBASIC23.77■■□□□ 1.4
CFTRP13569 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC23.77■■□□□ 1.4
CFTRP13569 IGHVII-74-1-201ENST00000517572 241 ntBASIC23.77■■□□□ 1.4
CFTRP13569 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC23.77■■□□□ 1.4
CFTRP13569 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC23.77■■□□□ 1.4
CFTRP13569 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CFTRP13569 AC137723.2-201ENST00000623540 398 ntBASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms