Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 AC072061.1-201ENST00000569710 2234 ntBASIC13.76□□□□□ -0.21
LAMP1P11279 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.76□□□□□ -0.21
LAMP1P11279 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LAMP1P11279 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LAMP1P11279 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LAMP1P11279 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LAMP1P11279 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.76□□□□□ -0.21
LAMP1P11279 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LAMP1P11279 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LAMP1P11279 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LAMP1P11279 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.76□□□□□ -0.21
LAMP1P11279 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LAMP1P11279 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LAMP1P11279 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LAMP1P11279 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LAMP1P11279 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.76□□□□□ -0.21
LAMP1P11279 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LAMP1P11279 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.76□□□□□ -0.21
LAMP1P11279 SHC1P1-201ENST00000425230 1745 ntBASIC13.76□□□□□ -0.21
LAMP1P11279 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LAMP1P11279 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LAMP1P11279 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.75□□□□□ -0.21
LAMP1P11279 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LAMP1P11279 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LAMP1P11279 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LAMP1P11279 CU639417.3-201ENST00000624240 1404 ntBASIC13.75□□□□□ -0.21
LAMP1P11279 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.75□□□□□ -0.21
LAMP1P11279 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LAMP1P11279 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LAMP1P11279 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LAMP1P11279 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.75□□□□□ -0.21
LAMP1P11279 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LAMP1P11279 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.75□□□□□ -0.21
LAMP1P11279 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LAMP1P11279 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.75□□□□□ -0.21
LAMP1P11279 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.75□□□□□ -0.21
LAMP1P11279 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LAMP1P11279 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.75□□□□□ -0.21
LAMP1P11279 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.75□□□□□ -0.21
LAMP1P11279 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.75□□□□□ -0.21
LAMP1P11279 PPY2P-201ENST00000582808 702 ntBASIC13.75□□□□□ -0.21
LAMP1P11279 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LAMP1P11279 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LAMP1P11279 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.75□□□□□ -0.21
LAMP1P11279 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
LAMP1P11279 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LAMP1P11279 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.75□□□□□ -0.21
LAMP1P11279 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
LAMP1P11279 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.75□□□□□ -0.21
LAMP1P11279 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LAMP1P11279 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LAMP1P11279 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LAMP1P11279 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.75□□□□□ -0.21
LAMP1P11279 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LAMP1P11279 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.74□□□□□ -0.21
LAMP1P11279 TMBIM7P-202ENST00000641474 1516 ntBASIC13.74□□□□□ -0.21
LAMP1P11279 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.74□□□□□ -0.21
LAMP1P11279 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LAMP1P11279 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.74□□□□□ -0.21
LAMP1P11279 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LAMP1P11279 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
LAMP1P11279 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LAMP1P11279 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LAMP1P11279 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
LAMP1P11279 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LAMP1P11279 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LAMP1P11279 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.74□□□□□ -0.21
LAMP1P11279 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LAMP1P11279 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.74□□□□□ -0.21
LAMP1P11279 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.74□□□□□ -0.21
LAMP1P11279 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LAMP1P11279 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LAMP1P11279 MIR326-201ENST00000362220 95 ntBASIC13.74□□□□□ -0.21
LAMP1P11279 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LAMP1P11279 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LAMP1P11279 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LAMP1P11279 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.74□□□□□ -0.21
LAMP1P11279 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.74□□□□□ -0.21
LAMP1P11279 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.74□□□□□ -0.21
LAMP1P11279 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.74□□□□□ -0.21
LAMP1P11279 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.74□□□□□ -0.21
LAMP1P11279 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LAMP1P11279 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.74□□□□□ -0.21
LAMP1P11279 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.74□□□□□ -0.21
LAMP1P11279 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
LAMP1P11279 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.74□□□□□ -0.21
LAMP1P11279 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LAMP1P11279 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.74□□□□□ -0.21
LAMP1P11279 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.74□□□□□ -0.21
LAMP1P11279 AC126335.2-201ENST00000623362 4637 ntBASIC13.74□□□□□ -0.21
LAMP1P11279 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
LAMP1P11279 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LAMP1P11279 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LAMP1P11279 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LAMP1P11279 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LAMP1P11279 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LAMP1P11279 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
LAMP1P11279 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LAMP1P11279 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LAMP1P11279 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms