Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RETP07949 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.62□□□□□ -0.07
RETP07949 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RETP07949 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.62□□□□□ -0.07
RETP07949 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RETP07949 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RETP07949 AC144522.1-201ENST00000625111 1658 ntBASIC14.61□□□□□ -0.07
RETP07949 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RETP07949 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RETP07949 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RETP07949 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RETP07949 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RETP07949 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.61□□□□□ -0.07
RETP07949 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RETP07949 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RETP07949 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RETP07949 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RETP07949 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RETP07949 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.61□□□□□ -0.07
RETP07949 TSPY25P-201ENST00000429463 745 ntBASIC14.61□□□□□ -0.07
RETP07949 GCSHP3-201ENST00000431120 391 ntBASIC14.61□□□□□ -0.07
RETP07949 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC14.61□□□□□ -0.07
RETP07949 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC14.61□□□□□ -0.07
RETP07949 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RETP07949 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC14.61□□□□□ -0.07
RETP07949 AC006122.1-201ENST00000493323 440 ntBASIC14.61□□□□□ -0.07
RETP07949 ORAOV1P1-201ENST00000503108 395 ntBASIC14.61□□□□□ -0.07
RETP07949 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RETP07949 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.61□□□□□ -0.07
RETP07949 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC14.61□□□□□ -0.07
RETP07949 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RETP07949 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
RETP07949 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RETP07949 MIR3180-2-201ENST00000581748 88 ntBASIC14.61□□□□□ -0.07
RETP07949 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC14.61□□□□□ -0.07
RETP07949 DGAT2L7P-201ENST00000602462 744 ntBASIC14.61□□□□□ -0.07
RETP07949 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.61□□□□□ -0.07
RETP07949 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.61□□□□□ -0.07
RETP07949 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RETP07949 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RETP07949 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.61□□□□□ -0.07
RETP07949 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.61□□□□□ -0.07
RETP07949 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RETP07949 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RETP07949 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RETP07949 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RETP07949 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RETP07949 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RETP07949 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RETP07949 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RETP07949 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.61□□□□□ -0.07
RETP07949 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
RETP07949 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RETP07949 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RETP07949 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RETP07949 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RETP07949 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RETP07949 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
RETP07949 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.6□□□□□ -0.07
RETP07949 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RETP07949 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RETP07949 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RETP07949 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RETP07949 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RETP07949 AC139749.1-202ENST00000617529 3139 ntBASIC14.6□□□□□ -0.07
RETP07949 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RETP07949 LINC01165-201ENST00000445190 1623 ntBASIC14.6□□□□□ -0.07
RETP07949 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.6□□□□□ -0.07
RETP07949 MYO15B-237ENST00000642007 4893 ntBASIC14.6□□□□□ -0.07
RETP07949 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.6□□□□□ -0.07
RETP07949 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RETP07949 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RETP07949 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RETP07949 RN7SKP230-201ENST00000365642 335 ntBASIC14.6□□□□□ -0.07
RETP07949 AL357563.1-201ENST00000404728 395 ntBASIC14.6□□□□□ -0.07
RETP07949 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.6□□□□□ -0.07
RETP07949 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC14.6□□□□□ -0.07
RETP07949 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.6□□□□□ -0.07
RETP07949 AL157407.1-201ENST00000435784 904 ntBASIC14.6□□□□□ -0.07
RETP07949 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.6□□□□□ -0.07
RETP07949 FTH1P22-201ENST00000456305 520 ntBASIC14.6□□□□□ -0.07
RETP07949 FAM86KP-201ENST00000509817 987 ntBASIC14.6□□□□□ -0.07
RETP07949 AC114947.1-202ENST00000514136 344 ntBASIC14.6□□□□□ -0.07
RETP07949 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RETP07949 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.6□□□□□ -0.07
RETP07949 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RETP07949 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.6□□□□□ -0.07
RETP07949 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC14.6□□□□□ -0.07
RETP07949 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.6□□□□□ -0.07
RETP07949 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.6□□□□□ -0.07
RETP07949 HKR1-225ENST00000592168 566 ntTSL 4 BASIC14.6□□□□□ -0.07
RETP07949 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.6□□□□□ -0.07
RETP07949 DBP-202ENST00000593500 712 ntTSL 2 BASIC14.6□□□□□ -0.07
RETP07949 AC084781.1-201ENST00000613737 656 ntBASIC14.6□□□□□ -0.07
RETP07949 AC018695.6-201ENST00000614011 534 ntBASIC14.6□□□□□ -0.07
RETP07949 AC133540.1-201ENST00000620845 1019 ntBASIC14.6□□□□□ -0.07
RETP07949 AC027601.3-201ENST00000622907 509 ntBASIC14.6□□□□□ -0.07
RETP07949 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.6□□□□□ -0.07
RETP07949 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.6□□□□□ -0.07
RETP07949 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms