Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-AP01891 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-AP01891 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-AP01891 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.32□□□□□ -0.44
HLA-AP01891 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.32□□□□□ -0.44
HLA-AP01891 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.32□□□□□ -0.44
HLA-AP01891 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-AP01891 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.32□□□□□ -0.44
HLA-AP01891 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.32□□□□□ -0.44
HLA-AP01891 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.32□□□□□ -0.44
HLA-AP01891 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-AP01891 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
HLA-AP01891 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.32□□□□□ -0.44
HLA-AP01891 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
HLA-AP01891 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.32□□□□□ -0.44
HLA-AP01891 AC000095.1-201ENST00000603208 874 ntBASIC12.32□□□□□ -0.44
HLA-AP01891 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.32□□□□□ -0.44
HLA-AP01891 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-AP01891 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-AP01891 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.32□□□□□ -0.44
HLA-AP01891 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
HLA-AP01891 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-AP01891 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-AP01891 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-AP01891 AC015688.4-201ENST00000580780 1647 ntBASIC12.32□□□□□ -0.44
HLA-AP01891 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-AP01891 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-AP01891 PTPRVP-205ENST00000641549 5067 ntBASIC12.32□□□□□ -0.44
HLA-AP01891 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HLA-AP01891 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-AP01891 TUBB8P4-201ENST00000511806 1324 ntBASIC12.32□□□□□ -0.44
HLA-AP01891 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-AP01891 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-AP01891 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-AP01891 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HLA-AP01891 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-AP01891 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-AP01891 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-AP01891 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-AP01891 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.32□□□□□ -0.44
HLA-AP01891 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.32□□□□□ -0.44
HLA-AP01891 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.31□□□□□ -0.44
HLA-AP01891 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.31□□□□□ -0.44
HLA-AP01891 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
HLA-AP01891 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
HLA-AP01891 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
HLA-AP01891 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
HLA-AP01891 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.31□□□□□ -0.44
HLA-AP01891 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.31□□□□□ -0.44
HLA-AP01891 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 CETN4P-206ENST00000642099 2168 ntBASIC12.31□□□□□ -0.44
HLA-AP01891 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.31□□□□□ -0.44
HLA-AP01891 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.31□□□□□ -0.44
HLA-AP01891 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.31□□□□□ -0.44
HLA-AP01891 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 AC107890.1-201ENST00000422478 521 ntBASIC12.31□□□□□ -0.44
HLA-AP01891 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.31□□□□□ -0.44
HLA-AP01891 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.31□□□□□ -0.44
HLA-AP01891 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.31□□□□□ -0.44
HLA-AP01891 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.31□□□□□ -0.44
HLA-AP01891 DUX4L27-201ENST00000554796 1261 ntBASIC12.31□□□□□ -0.44
HLA-AP01891 AL079307.3-201ENST00000556114 283 ntBASIC12.31□□□□□ -0.44
HLA-AP01891 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.31□□□□□ -0.44
HLA-AP01891 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.31□□□□□ -0.44
HLA-AP01891 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.31□□□□□ -0.44
HLA-AP01891 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.31□□□□□ -0.44
HLA-AP01891 SPDYE12P-201ENST00000618416 771 ntBASIC12.31□□□□□ -0.44
HLA-AP01891 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.31□□□□□ -0.44
HLA-AP01891 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
HLA-AP01891 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.31□□□□□ -0.44
HLA-AP01891 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
HLA-AP01891 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.31□□□□□ -0.44
HLA-AP01891 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.31□□□□□ -0.44
HLA-AP01891 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms